Transcript

znf395-006

ID

ZDB-TSCRIPT-130528-643

Name

znf395-006 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

fam49a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000153070 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000153070.3|gene_biotype:protein_coding|ENSDARG00000006672.12 transcript_biotype:retained_intron gene_symbol:fam49a cdna chromosome:GRCz11:20:35290834:35296967:1
TTCTTATGCAGTGAAATCCATTGCCTGTGATAACTAGTGT
TCAACAGCACATAATGAAGTTTATTTGTGTCAGACGCACA
ACCAACAGACTGTGAGAGAGAAGTGTGGAACCAGGTGAAT
GCTGTTCTCCAGGAGTCTGAGAGCATCCTCTCTGGCCTTC
AAGCCTACAAGGGTGCAGGCCAGGAAATACGAGATGCAAT
TCAGAATCCTAACGACATGCTCCTTCAGGAAAGGGCATGG
AACTCTGTGTGTCCCCTTGTCATCCGGCTAAAGAAGTTCT
ATGCGTTTTCATTGAAACTAGAGCAAGCGCTGCAGAGTCT
TTTGGAGTCTCTGACGTGTCCACCATACACTCCCACTCAG
CACCTGGAGAGAGAGCAGGCCCTCGCTAAACAGTTTGCTG
AAATCCTGCATTTCACCCTCCGCTTTGATGAGCTTAAGAT
GAGAATACCAGCCATCCAGAATGACTTCAGCTACTACAGA
AGAACAATCAGTCGAAACCGATTAAACAACATGAATCTTG
ATATTGAAAATGAGGTCAATAATGAAATGGCAAACAGAAT
GTCTCTGTTCTATGCTGAAGCCACGCCGATGTTGAAGACC
TTGAGCACAGCAACAACAAACTTTGTGACAGAGAATAAGA
CATTACCTCTTGAGAACACCACAGACTGCCTGAGCACTAT
GGCAAGTGTTTGCAAGGTCATGCTGGAGACACCAGAATAC
ACAAGTCGATTCAACAGT

OTTDART00000058588 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058588|OTTDARG00000005734|ZDB-GENE-031002-50 znf395|no_translation znf395-006 LG_none BX511007.16,BX470193.5 Danio rerio protein_coding KNOWN, 738 bp
TTCTTATGCAGTGAAATCCATTGCCTGTGATAACTAGTGT
TCAACAGCACATAATGAAGTTTATTTGTGTCAGACGCACA
ACCAACAGACTGTGAGAGAGAAGTGTGGAACCAGGTGAAT
GCTGTTCTCCAGGAGTCTGAGAGCATCCTCTCTGGCCTTC
AAGCCTACAAGGGTGCAGGCCAGGAAATACGAGATGCAAT
TCAGAATCCTAACGACATGCTCCTTCAGGAAAGGGCATGG
AACTCTGTGTGTCCCCTTGTCATCCGGCTAAAGAAGTTCT
ATGCGTTTTCATTGAAACTAGAGCAAGCGCTGCAGAGTCT
TTTGGAGTCTCTGACGTGTCCACCATACACTCCCACTCAG
CACCTGGAGAGAGAGCAGGCCCTCGCTAAACAGTTTGCTG
AAATCCTGCATTTCACCCTCCGCTTTGATGAGCTTAAGAT
GAGAATACCAGCCATCCAGAATGACTTCAGCTACTACAGA
AGAACAATCAGTCGAAACCGATTAAACAACATGAATCTTG
ATATTGAAAATGAGGTCAATAATGAAATGGCAAACAGAAT
GTCTCTGTTCTATGCTGAAGCCACGCCGATGTTGAAGACC
TTGAGCACAGCAACAACAAACTTTGTGACAGAGAATAAGA
CATTACCTCTTGAGAACACCACAGACTGCCTGAGCACTAT
GGCAAGTGTTTGCAAGGTCATGCTGGAGACACCAGAATAC
ACAAGTCGATTCAACAGT

Related Transcripts

Transcripts related to fam49a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	fam49a-201 (1) Ensembl	Ensembl	1,851 nt	Select Tool
mRNA	fam49a-203 (1) Ensembl	Ensembl	1,850 nt	Select Tool
mRNA	fam49a-206 (1) Ensembl	Ensembl	889 nt	Select Tool
mRNA	fam49a-208 (1) Ensembl	Ensembl	1,854 nt	Select Tool ZFIN BLAST
mRNA	fam49a-209 (1) Ensembl	Ensembl	1,668 nt	Select Tool ZFIN BLAST
ncRNA	znf395-003 (1) Ensembl	Ensembl	302 nt	Select Tool
ncRNA	znf395-004 (1) Ensembl	Ensembl	892 nt	Select Tool
ncRNA	znf395-006	Ensembl	738 nt
ncRNA	znf395-007 (1) Ensembl	Ensembl	729 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations