Transcript

ckbb-205

ID

ZDB-TSCRIPT-121213-607

Name

ckbb-205 Nomenclature History

Previous Names

ckb-008
ckbb-008

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ckbb (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000152118 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000152118.3|gene_biotype:protein_coding|ENSDARG00000043257.8 transcript_biotype:nonsense_mediated_decay gene_symbol:ckbb cdna chromosome:GRCz11:20:20817235:20821781:-1
CATTATCAGTCTTTGTGTGGTTTCTGGTGGACTTTAGGAA
GGATTAATTCCGCTTTCCCAAAGAAAATCGGTATAAGGTA
GACGCAATCATGCCTTTCGGTAACACTCACAATCTGCTGA
AGATGAACTACTCCGCCGAGCAGGAGTATCCCGACCTCAC
CAAGCACAACAACCACATGGCGAAGATGACCTTGACCCCA
ACTACGTTCTGAGCTCCAGAGTACGAACCGGCAGGAGCAT
CCGCGGCTTCTGCCTCCCCCCTCATTGCAGCCGTGGGGAG
AGACGCGGTATCGAGAGTCTGTCTGTCGAGGCTTTGGGGG
CTCTTGATGGTGATCTCAAAGGAAAGTACTACGCCCTCAA
GGACATGACGGAGGAGGAGCAGCAGCAGCTGATTGATGAC
CACTTCCTGTTTGATAAGCCTGTGTCTCCACTGTTGCTGG
CCTCTGGGATGGCCCGTGACTGGCCTGATGCCAGGGGGAT
CTGGCACAATGACAATAAGACATTCCTAGTGTGGGTGAAT
GAGGAAGACCATCTACGTGTCATCTCCATGCAGAAAGGTG
GCAACATGAGGGAAGTCTTCAATCGCTTCTGCACAGGCCT
CACAAAGATTGAGGAACTGTTTAAAGAGAAGGGCCATGAG
TTTATGTGGAACGAGCACTTGGGCTACGTCTTAACCTGCC
CCTCCAACCTGGGCACAGGGTTGCGTGGTGGCGTTCATGT
CAAACTCCCTAACGTAAGCAAGCATGAGAAGTTTGGTGAG
ATTCTTAAGCGACTCCGGCTTCAAAAGCGTG

OTTDART00000058167 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058167|OTTDARG00000004927|ZDB-GENE-020103-2 ckbb|OTTDARP00000045538 ckb-008 LG_ BX248125.10 Danio rerio protein_coding KNOWN, 791 bp
CATTATCAGTCTTTGTGTGGTTTCTGGTGGACTTTAGGAA
GGATTAATTCCGCTTTCCCAAAGAAAATCGGTATAAGGTA
GACGCAATCATGCCTTTCGGTAACACTCACAATCTGCTGA
AGATGAACTACTCCGCCGAGCAGGAGTATCCCGACCTCAC
CAAGCACAACAACCACATGGCGAAGATGACCTTGACCCCA
ACTACGTTCTGAGCTCCAGAGTACGAACCGGCAGGAGCAT
CCGCGGCTTCTGCCTCCCCCCTCATTGCAGCCGTGGGGAG
AGACGCGGTATCGAGAGTCTGTCTGTCGAGGCTTTGGGGG
CTCTTGATGGTGATCTCAAAGGAAAGTACTACGCCCTCAA
GGACATGACGGAGGAGGAGCAGCAGCAGCTGATTGATGAC
CACTTCCTGTTTGATAAGCCTGTGTCTCCACTGTTGCTGG
CCTCTGGGATGGCCCGTGACTGGCCTGATGCCAGGGGGAT
CTGGCACAATGACAATAAGACATTCCTAGTGTGGGTGAAT
GAGGAAGACCATCTACGTGTCATCTCCATGCAGAAAGGTG
GCAACATGAGGGAAGTCTTCAATCGCTTCTGCACAGGCCT
CACAAAGATTGAGGAACTGTTTAAAGAGAAGGGCCATGAG
TTTATGTGGAACGAGCACTTGGGCTACGTCTTAACCTGCC
CCTCCAACCTGGGCACAGGGTTGCGTGGTGGCGTTCATGT
CAAACTCCCTAACGTAAGCAAGCATGAGAAGTTTGGTGAG
ATTCTTAAGCGACTCCGGCTTCAAAAGCGTG

Related Transcripts

Transcripts related to ckbb

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ckbb-203 (1) Ensembl	Ensembl	733 nt	Select Tool ZFIN BLAST
aberrant processed transcript	ckbb-205	Ensembl	791 nt
mRNA	ckbb-201 (1) Ensembl	Ensembl	1,464 nt	Select Tool ZFIN BLAST
mRNA	ckbb-204 (1) Ensembl	Ensembl	881 nt	Select Tool ZFIN BLAST
mRNA	ckbb-207 (1) Ensembl	Ensembl	861 nt	Select Tool ZFIN BLAST
ncRNA	ckbb-004 (1) Ensembl	Ensembl	597 nt	Select Tool ZFIN BLAST
ncRNA	ckbb-005 (1) Ensembl	Ensembl	947 nt	Select Tool ZFIN BLAST
ncRNA	ckbb-006 (1) Ensembl	Ensembl	516 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations