Transcript

col16a1-003

ID

ZDB-TSCRIPT-120702-343

Name

col16a1-003 Nomenclature History

Previous Names

dkey-27a13.1-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

col16a1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000152017 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000152017.2|gene_biotype:protein_coding|ENSDARG00000009194.14 transcript_biotype:retained_intron  cdna chromosome:GRCz11:19:38482489:38487275:-1
CTTTCTCCAGAAGATAAAAATATTTTCAGATGTACTGTGA
AAATGTACTTGCTTTGTCAAACATCATTTGGGAAATATTT
AAAAAAGAAAAAATATTAAAGGGGGCTAATAATTCTCAGA
AAGAAGAGTGTTTCCCAGTGATGGGTTGCAGCTGGAAGGG
CATCTGCTGTGTAAAACACATGCTGGATAAGTTGGCGGTT
CATTCCGCTGTAGCAACCCCTGATTAATAAAGGGACTATA
CTGAAAAGCAAATGAATATAATATATAATCCTGATTTGCT
GTGATGTTCCACAATCTGAAACATTTTTATGGCTTTTAAT
TCCATTTTCTTCCTCTATGTTAAGCTGCTTTGGCACATTC
TACATTGTAAAAATAAAAAAATAAAGATGAATTTAATTAA
ACTGAATTTAATAATAGCTGTATAAATTGTTATTACTGTA
TCTTTAAATAATCAAACATTTCTTTCTGTTTCTCTCTGCG
TTTTATTCTCACAATCAAACAGGGTGAACCAGGACCAGCT
GGCCAGCCTGGACTCAGGGGAATCCCGGGTTTCAAGGGCA
TCAAAGGACACACGGGTCTCCCTGGAATGAAAGGAGAAAG
AGGACCACAGGGACCAGCCGGAGCCTCAGGAAGGCCTGGT
CTTGAGGGTGATCTTGGTCCCCCTGGACCTCAGGGACCAC
CTGGAGCTCCAGGACATTTGGGTGCTGTCGGACCCGTAGG
GCCACCGGGACCAGTTGGGCCACCTGGAGCTG

OTTDART00000056172 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000056172|OTTDARG00000015395|ZDB-GENE-060503-351 col16a1|no_translation DKEY-27A13.1-003 LG_ BX640468.10 Danio rerio protein_coding NOVEL, 752 bp
CTTTCTCCAGAAGATAAAAATATTTTCAGATGTACTGTGA
AAATGTACTTGCTTTGTCAAACATCATTTGGGAAATATTT
AAAAAAGAAAAAATATTAAAGGGGGCTAATAATTCTCAGA
AAGAAGAGTGTTTCCCAGTGATGGGTTGCAGCTGGAAGGG
CATCTGCTGTGTAAAACACATGCTGGATAAGTTGGCGGTT
CATTCCGCTGTAGCAACCCCTGATTAATAAAGGGACTATA
CTGAAAAGCAAATGAATATAATATATAATCCTGATTTGCT
GTGATGTTCCACAATCTGAAACATTTTTATGGCTTTTAAT
TCCATTTTCTTCCTCTATGTTAAGCTGCTTTGGCACATTC
TACATTGTAAAAATAAAAAAATAAAGATGAATTTAATTAA
ACTGAATTTAATAATAGCTGTATAAATTGTTATTACTGTA
TCTTTAAATAATCAAACATTTCTTTCTGTTTCTCTCTGCG
TTTTATTCTCACAATCAAACAGGGTGAACCAGGACCAGCT
GGCCAGCCTGGACTCAGGGGAATCCCGGGTTTCAAGGGCA
TCAAAGGACACACGGGTCTCCCTGGAATGAAAGGAGAAAG
AGGACCACAGGGACCAGCCGGAGCCTCAGGAAGGCCTGGT
CTTGAGGGTGATCTTGGTCCCCCTGGACCTCAGGGACCAC
CTGGAGCTCCAGGACATTTGGGTGCTGTCGGACCCGTAGG
GCCACCGGGACCAGTTGGGCCACCTGGAGCTG

Related Transcripts

Transcripts related to col16a1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	col16a1-201 (1) Ensembl	Ensembl	538 nt	Select Tool
mRNA	col16a1-202 (1) Ensembl	Ensembl	5,413 nt	Select Tool
mRNA	col16a1-203 (1) Ensembl	Ensembl	313 nt	Select Tool
ncRNA	col16a1-003	Ensembl	752 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations