Transcript

baxa-203

ID

ZDB-TSCRIPT-120213-606

Name

baxa-203 Nomenclature History

Previous Names

ottdart00000053696

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

baxa (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000124305 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000124305.3|gene_biotype:protein_coding|ENSDARG00000089129.4 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:3:37767285:37773800:-1
ATTCACATTTCCGCCGCCCAATGAAATCTCCCAGAAATCT
TTTTAATAACGCGTTCTCGCTCACTCAGTCACAGTTTTCA
TCATACTGCTGACATGGAAGCGCTGTTGGATTACGTTGTT
CGTATTGGCAGTGGCAATGATCAGACACTTGATGCAGGAT
CTGCAGTTCTCTTTAACTTCATCTTTGAATGGCTTCATCA
ACACTTAGACAAAGAAGCTGAAATAACCTGTTGGTTACAA
AATAATTTGGGTATTGTTGAGAAAAGTGACCCCAGCCATA
AAGATGCAATCGAGTGTATGGTGAGGATTGCAAATGAAAT
GGAAGGAAATGAAGAACTACAAGGGATGTTAAATAGCGCT
CTCTTAAATCCAACTCTAGAACACTACATCCTTGTGGTCA
ATGGGACCTTCTCTGATGTGACATTAAGCTGGGGCTGCTG
AAATCAACTCTGTTGACTTGGTCAGAAGCATTATAAACTG
GACTATGCCTTTTATTAGAAAGACCTGCATTTTAACCTGG
ATCAGGGAACAGGGTGGATGGGGCGCAATCCGCTCATATT
TCGGGACCCCCACCTGGCAGACAGTTGGAGTTTTCCTTGC
TGGAGTTCTTACTGTAGGCTTGGTGCTCTACAAAATGTGA
ACCCGAGGATGACAAAGTGGAATAACAGAGAGTCGAGACA
TTGAGGCTGAAACAGACCAGCAAAATATAATGGAAGGATA
AGGGTGAAGAGAAAGTTGAAAAAAGAAAGATGACACATTG
TCTCAAGCCACTTTTGTTACCCCTATTCTTCTGCTGTGAT
TATTTTGCTTTTTAAATCTTGAACAATTATGTCTTTTAAT
TAAATATTTAATTTTAAAATT

OTTDART00000053696 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053696|OTTDARG00000037551|ZDB-GENE-000511-6 baxa|OTTDARP00000042212 baxa-002 LG_ CR388062.19 Danio rerio protein_coding KNOWN, 861 bp
ATTCACATTTCCGCCGCCCAATGAAATCTCCCAGAAATCT
TTTTAATAACGCGTTCTCGCTCACTCAGTCACAGTTTTCA
TCATACTGCTGACATGGAAGCGCTGTTGGATTACGTTGTT
CGTATTGGCAGTGGCAATGATCAGACACTTGATGCAGGAT
CTGCAGTTCTCTTTAACTTCATCTTTGAATGGCTTCATCA
ACACTTAGACAAAGAAGCTGAAATAACCTGTTGGTTACAA
AATAATTTGGGTATTGTTGAGAAAAGTGACCCCAGCCATA
AAGATGCAATCGAGTGTATGGTGAGGATTGCAAATGAAAT
GGAAGGAAATGAAGAACTACAAGGGATGTTAAATAGCGCT
CTCTTAAATCCAACTCTAGAACACTACATCCTTGTGGTCA
ATGGGACCTTCTCTGATGTGACATTAAGCTGGGGCTGCTG
AAATCAACTCTGTTGACTTGGTCAGAAGCATTATAAACTG
GACTATGCCTTTTATTAGAAAGACCTGCATTTTAACCTGG
ATCAGGGAACAGGGTGGATGGGGCGCAATCCGCTCATATT
TCGGGACCCCCACCTGGCAGACAGTTGGAGTTTTCCTTGC
TGGAGTTCTTACTGTAGGCTTGGTGCTCTACAAAATGTGA
ACCCGAGGATGACAAAGTGGAATAACAGAGAGTCGAGACA
TTGAGGCTGAAACAGACCAGCAAAATATAATGGAAGGATA
AGGGTGAAGAGAAAGTTGAAAAAAGAAAGATGACACATTG
TCTCAAGCCACTTTTGTTACCCCTATTCTTCTGCTGTGAT
TATTTTGCTTTTTAAATCTTGAACAATTATGTCTTTTAAT
TAAATATTTAATTTTAAAATT

Related Transcripts

Transcripts related to baxa

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	baxa-203	Ensembl	861 nt
mRNA	baxa-201 (1) Ensembl	Ensembl	1,981 nt	Select Tool ZFIN BLAST
mRNA	baxa-204 (1) Ensembl	Ensembl	1,720 nt	Select Tool ZFIN BLAST
ncRNA	baxa-002 (1) Ensembl	Ensembl	676 nt	Select Tool ZFIN BLAST
ncRNA	baxa-003 (1) Ensembl	Ensembl	734 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations