Transcript

si:ch1073-450f2.1-202

ID

ZDB-TSCRIPT-120213-466

Name

si:ch1073-450f2.1-202 Nomenclature History

Previous Names

ch1073-450f2.1-001
ottdart00000053146

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

shank2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000169782 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000169782.3|gene_biotype:protein_coding|ENSDARG00000102443.3 transcript_biotype:protein_coding cdna chromosome:GRCz11:18:50880096:50889524:1
GGATTCTCTCTCAAGCTTTTCTGCTGATATTTGCTTAAAG
GATGTGTTTGCTGTAATATCTCATCTTTCATCAGACGCTC
TGTTAAAGAGACATGAGGGATGTGTAAGGACTCAGTCTGA
TGGGAATCTAGTGACCGATGAACAGCTTCTCCTCCTGGCT
TCAAGCGGACAGCAGGACGACTTTCAGGAGCTGCTGAAGT
GTTGACTATGCCCCGCAGCCCCACATCCAGTGAGGATGAG
ATGGCACAGAGTTTCTCAGATTCCTCTCAGGACTCGAGCT
CTGAAAGCTCCAGGGAAGAGGCTGTGTATGAGAGAGTACG
AGCAGAACGGCCCGTCAGCCGCATGATGGACATCCAGAGC
AACACACTGATGGTCCAAGTGTTCATCCCAGACCTGCAGC
AGACCAAGTGTCTGCGCTTCGACCCCTGCGCCTCAGTCTG
GGCTGCGAAACAGAGGATCTTGTGCACGCTCAGCCAGAAC
CTGAAGGATGTGCTGAACTTCGGCCTCTTCCAGCCGTCCA
GCAGTGGTGATGGAGGATTCCTGGAGGAGGAGAGTCTGAT
GGGAGATCTTCCAGTGCCTGCTGGAGAGAGTCTACCCATG
CTGGAGTTTCGCTATAAAACGAGGCTGTACAGTCAGTCCA
GTGTGGACGAGAAGCAGATCGCCAGGCTGCACACTAAGGC
CAACCTGAGGAGGTTCATGGACTGCATCCTGCATCGTCAG
CTGGAGAAAGTGTCCAGAATGCTGGATAAAGGACTGGACC
CCAATTACCAGGACTCTGAGAGCGGAGAGGCTCCGCTGAC
GTTGGCGGTGCAGATGGAGAGTATGGTGGAGTTTATTAAA
GCGCTGAGGAACGGAGGAGCTCATCTGGACTTCAGGGCTA
AAGACGGCATGACGGCTCTGCATAAAGCAGCCTGCGCTAA
AAACCAGGACGCGCTCAAGACGCTGCTGGATCTCGGAGCG
TCTCCAAACTCTAAGGACAGTCGTGGTCTGACGGCTCTGT
ACCACACAGTGACGGCCGGTGGAGAGACACACTGCTGTGA
GCTGCTGCTGGACGCCAACACTGCTCTCTGCTGCCAGGAC
GAGAACGGCTGGCAGGAGACACACCAGGCGTGTCGTCATG
GTTACGTCGAGCACCTGGAGCATCTGCTGTGTTACGGAGC
AGACATGAGCGCGCAGAACGCTTCAGGAAACACACCTCTG
CACATCTGCGCACTCTACAACCAGGAGAAGTGTGCTCATG
TGCTGCTGCTCAGAGGAGCTGATAAAGACATGAAGAACTA
CAGCAGCCAGAGCCCCTTTCAGGTTGCTTTAATCTCTGGG
AATTTCGAGTTGGCGGAGCTCATCAAGAACCACAGAGACC
CTGAACCAG

OTTDART00000053146 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053146|OTTDARG00000037287|ZDB-GENE-120215-55 si:ch1073-450f2.1|OTTDARP00000041799 CH1073-450F2.1-001 LG_ CU929126.4 Danio rerio protein_coding NOVEL, 1162 bp
ATGCCCCGCAGCCCCACATCCAGTGAGGATGAGATGGCAC
AGAGTTTCTCAGATTCCTCTCAGGACTCGAGCTCTGAAAG
CTCCAGGGAAGAGGCTGTGTATGAGAGAGTACGAGCAGAA
CGGCCCGTCAGCCGCATGATGGACATCCAGAGCAACACAC
TGATGGTCCAAGTGTTCATCCCAGACCTGCAGCAGACCAA
GTGTCTGCGCTTCGACCCCTGCGCCTCAGTCTGGGCTGCG
AAACAGAGGATCTTGTGCACGCTCAGCCAGAACCTGAAGG
ATGTGCTGAACTTCGGCCTCTTCCAGCCGTCCAGCAGTGG
TGATGGAGGATTCCTGGAGGAGGAGAGTCTGATGGGAGAT
CTTCCAGTGCCTGCTGGAGAGAGTCTACCCATGCTGGAGT
TTCGCTATAAAACGAGGCTGTACAGTCAGTCCAGTGTGGA
CGAGAAGCAGATCGCCAGGCTGCACACTAAGGCCAACCTG
AGGAGGTTCATGGACTGCATCCTGCATCGTCAGCTGGAGA
AAGTGTCCAGAATGCTGGATAAAGGACTGGACCCCAATTA
CCAGGACTCTGAGAGCGGAGAGGCTCCGCTGACGTTGGCG
GTGCAGATGGAGAGTATGGTGGAGTTTATTAAAGCGCTGA
GGAACGGAGGAGCTCATCTGGACTTCAGGGCTAAAGACGG
CATGACGGCTCTGCATAAAGCAGCCTGCGCTAAAAACCAG
GACGCGCTCAAGACGCTGCTGGATCTCGGAGCGTCTCCAA
ACTCTAAGGACAGTCGTGGTCTGACGGCTCTGTACCACAC
AGTGACGGCCGGTGGAGAGACACACTGCTGTGAGCTGCTG
CTGGACGCCAACACTGCTCTCTGCTGCCAGGACGAGAACG
GCTGGCAGGAGACACACCAGGCGTGTCGTCATGGTTACGT
CGAGCACCTGGAGCATCTGCTGTGTTACGGAGCAGACATG
AGCGCGCAGAACGCTTCAGGAAACACACCTCTGCACATCT
GCGCACTCTACAACCAGGAGAAGTGTGCTCATGTGCTGCT
GCTCAGAGGAGCTGATAAAGACATGAAGAACTACAGCAGC
CAGAGCCCCTTTCAGGTTGCTTTAATCTCTGGGAATTTCG
AGTTGGCGGAGCTCATCAAGAACCACAGAGACCCTGAACC
AG

Related Transcripts

Transcripts related to shank2a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	shank2a-201 (1) Ensembl	Ensembl	2,622 nt	Select Tool ZFIN BLAST
mRNA	shank2a-204 (1) Ensembl	Ensembl	348 nt	Select Tool ZFIN BLAST
mRNA	si:ch1073-450f2.1-202	Ensembl	1,369 nt
mRNA	si:ch1073-450f2.1-203 (1) Ensembl	Ensembl	4,367 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations