Transcript

gpatch8-004

ID

ZDB-TSCRIPT-120213-217

Name

gpatch8-004 Nomenclature History

Previous Names

dkey-260c8.3-004

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

gpatch8 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000151745 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000151745.2|gene_biotype:protein_coding|ENSDARG00000059768.8 transcript_biotype:retained_intron gene_symbol:gpatch8 cdna chromosome:GRCz11:3:37669163:37670175:-1
AGCCAACTCAAATGGTAAACAATTAAAAATTAGCCTTAGT
TCCAAAGATATTTCAGCACCTGGAATGGCCTTTTAGGGGT
GAGCTGCACATGAAGCTGTGAGAATGGCTAGAGTTTGGTT
CACTGTAGCTTTCTGGTCTCTTGCACTTGAAGGCAGTCTC
TCTAACCCAGCACCCTGTGCTCTAAGCAGGCTGTCCCGCC
CCGAGTTTTCTCTTATATTGAACAATAGTCTAACCTCTGT
ACTATCTCTCTCTTCCTCTCCCCCCCACCTCATAGGACGA
ACTGACCCTGTCCCGATCGTGCTCAAATATGACGTCATGG
GAATGGGGCGAATGGAAATGGAGCTGGACTATGCAGAAGA
TGCCACAGAGAAGCGTCGAGTATTGGAAGTGGAAAAAGAA
GACACTGAGGAACTGCGTCAAAAATACAAGGATTTTGCAG
AGAAAGAAAAAGCTATTGCCAAAGCTTTAGAGGACCTAAG
GGCCAACTTCTACTGTGAACTGTGTGATAAGCAATACCAG
AAGCATCAGGAGTTTGACAATCACATCAACTCCTACGATC
ATGCACACAAGC

OTTDART00000053683 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053683|OTTDARG00000037547|ZDB-GENE-030131-6966 gpatch8|no_translation DKEY-260C8.3-004 LG_none BX640549.17,CR388062.19 Danio rerio protein_coding NOVEL, 572 bp
AGCCAACTCAAATGGTAAACAATTAAAAATTAGCCTTAGT
TCCAAAGATATTTCAGCACCTGGAATGGCCTTTTAGGGGT
GAGCTGCACATGAAGCTGTGAGAATGGCTAGAGTTTGGTT
CACTGTAGCTTTCTGGTCTCTTGCACTTGAAGGCAGTCTC
TCTAACCCAGCACCCTGTGCTCTAAGCAGGCTGTCCCGCC
CCGAGTTTTCTCTTATATTGAACAATAGTCTAACCTCTGT
ACTATCTCTCTCTTCCTCTCCCCCCCACCTCATAGGACGA
ACTGACCCTGTCCCGATCGTGCTCAAATATGACGTCATGG
GAATGGGGCGAATGGAAATGGAGCTGGACTATGCAGAAGA
TGCCACAGAGAAGCGTCGAGTATTGGAAGTGGAAAAAGAA
GACACTGAGGAACTGCGTCAAAAATACAAGGATTTTGCAG
AGAAAGAAAAAGCTATTGCCAAAGCTTTAGAGGACCTAAG
GGCCAACTTCTACTGTGAACTGTGTGATAAGCAATACCAG
AAGCATCAGGAGTTTGACAATCACATCAACTCCTACGATC
ATGCACACAAGC

Related Transcripts

Transcripts related to gpatch8

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	gpatch8-204 (1) Ensembl	Ensembl	569 nt	Select Tool
mRNA	gpatch8-201 (1) Ensembl	Ensembl	7,025 nt	Select Tool
mRNA	gpatch8-205 (1) Ensembl	Ensembl	4,393 nt	Select Tool ZFIN BLAST
ncRNA	gpatch8-003 (1) Ensembl	Ensembl	421 nt	Select Tool
ncRNA	gpatch8-004	Ensembl	572 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations