Transcript

kdm1a-005

ID

ZDB-TSCRIPT-110325-627

Name

kdm1a-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

kdm1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000149767 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000149767.2|gene_biotype:protein_coding|ENSDARG00000060679.6 transcript_biotype:retained_intron gene_symbol:kdm1a cdna chromosome:GRCz11:17:28099733:28101975:-1
GACAGTCGTCTGTTTCTTTGTGTGAAACCCCCCACAGCAG
CGAGGAGGAGAAGCCTCTGTCATCTGTGATGTTGTCCAAT
AAGAAGTCAGACCCAGGCTCCTCCTCTTCGTCAGGGGGTA
ATGGTGGTGATCGTGCTCCTGAAACCCTTGCTGCCCCTCA
GGCTGGTCCAGCGGGTCCCTCTGGCCCGATTTCAGCAGAT
GTGAAAAAGAAAGAAAGAGCCTCCCCAAGTGGAGAACCAG
GTGGACCCCCTCTGCCGCACCCTCCTGGACCAGGAGGCAT
TGATCAAGACTCTGCAGAGGGTCGTAGAACTAGTCGACGT
AAACGGGCAAAGGTAAACATCTCCAATAAATTTTCCTGTT
CTCTTCAAGAGAGAACAGGCACGATTGTGGTAGGCTTATT
TAGCTGAGTTTTACTGGATTTGAAAAAAGTAATATTATGA
ATGATATGGAATTTATTTTTTTTACTTTTAAATAAAAATA
TTATGTCCATTTTGACCCAAAGAGACATACAAAATATAAA
TATTTATAATTTGTAAATGTGATAAAATATGTTGATTTGT
GTAATTTTGCATTATTATAATTGTTTTTATTATTTTAGCA
GTGATGAGTAAATGTTCTTGATTAAGTGCATTCATTCAAG
TTGGTTGGATACTGGTAATTCTTAAATATACATTCTTATT
TTATGAAATTATTAAAAATGTGAACTTCATTCATTAATTT
TTCTTCGGCTTAGTCTCTGATTTATCAGGGGTCGCAACAG
AGGAATGAACTACTCTGGCTTATGTTTTACGCAGCGGATG
TCCTTCCAGCCTCAACCCAGCACCATACTGGGAAACACCC
ATACACTCGTATTAACACACACTCATACACTACAGACAAT
TTTGTTGTAGTATAGTTTTTGTTTTAATTGTGGTTCAGAT
ATTGTTGATGTAAAGAAATTTCACATAATTTCTCAATTGT
TTAATAATATGCTGG

OTTDART00000049903 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000049903|OTTDARG00000035108|ZDB-GENE-030131-7828 kdm1a|no_translation kdm1a-005 LG_ AL844186.7 Danio rerio protein_coding KNOWN, 975 bp
GACAGTCGTCTGTTTCTTTGTGTGAAACCCCCCACAGCAG
CGAGGAGGAGAAGCCTCTGTCATCTGTGATGTTGTCCAAT
AAGAAGTCAGACCCAGGCTCCTCCTCTTCGTCAGGGGGTA
ATGGTGGTGATCGTGCTCCTGAAACCCTTGCTGCCCCTCA
GGCTGGTCCAGCGGGTCCCTCTGGCCCGATTTCAGCAGAT
GTGAAAAAGAAAGAAAGAGCCTCCCCAAGTGGAGAACCAG
GTGGACCCCCTCTGCCGCACCCTCCTGGACCAGGAGGCAT
TGATCAAGACTCTGCAGAGGGTCGTAGAACTAGTCGACGT
AAACGGGCAAAGGTAAACATCTCCAATAAATTTTCCTGTT
CTCTTCAAGAGAGAACAGGCACGATTGTGGTAGGCTTATT
TAGCTGAGTTTTACTGGATTTGAAAAAAGTAATATTATGA
ATGATATGGAATTTATTTTTTTTACTTTTAAATAAAAATA
TTATGTCCATTTTGACCCAAAGAGACATACAAAATATAAA
TATTTATAATTTGTAAATGTGATAAAATATGTTGATTTGT
GTAATTTTGCATTATTATAATTGTTTTTATTATTTTAGCA
GTGATGAGTAAATGTTCTTGATTAAGTGCATTCATTCAAG
TTGGTTGGATACTGGTAATTCTTAAATATACATTCTTATT
TTATGAAATTATTAAAAATGTGAACTTCATTCATTAATTT
TTCTTCGGCTTAGTCTCTGATTTATCAGGGGTCGCAACAG
AGGAATGAACTACTCTGGCTTATGTTTTACGCAGCGGATG
TCCTTCCAGCCTCAACCCAGCACCATACTGGGAAACACCC
ATACACTCGTATTAACACACACTCATACACTACAGACAAT
TTTGTTGTAGTATAGTTTTTGTTTTAATTGTGGTTCAGAT
ATTGTTGATGTAAAGAAATTTCACATAATTTCTCAATTGT
TTAATAATATGCTGG

Related Transcripts

Transcripts related to kdm1a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	kdm1a-201 (1) Ensembl	Ensembl	3,367 nt	Select Tool
mRNA	kdm1a-202 (1) Ensembl	Ensembl	887 nt	Select Tool
mRNA	kdm1a-203 (1) Ensembl	Ensembl	500 nt	Select Tool
mRNA	kdm1a-204 (1) Ensembl	Ensembl	456 nt	Select Tool
mRNA	kdm1a-207 (1) Ensembl	Ensembl	606 nt	Select Tool
mRNA	kdm1a-208 (1) Ensembl	Ensembl	5,311 nt	Select Tool ZFIN BLAST
ncRNA	kdm1a-005	Ensembl	975 nt
ncRNA	kdm1a-006 (1) Ensembl	Ensembl	1,015 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations