Transcript

ctsd-202

ID

ZDB-TSCRIPT-110325-2235

Name

ctsd-202 Nomenclature History

Previous Names

ctsd-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ctsd (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000148584 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000148584.2|gene_biotype:protein_coding|ENSDARG00000057698.8 transcript_biotype:nonsense_mediated_decay gene_symbol:ctsd cdna chromosome:GRCz11:18:16133684:16140348:1
TGTGTCAGCTGACTGTGGCTGTTTGTCCTACATATTAGAC
CGCACAACAATAACATCCCCACAGCGATACTGCTCTCATT
ATCGTTAACTGGTCCTGAGGGCTCGCCAACATGAGAATCG
CCTTTTTGCTGCTCGTTGTTGCCTTTTTCTGCACGTCCGA
CGCGATTGTCCGGATACCACTAAAGAAGTTTCGAACCCTC
AGACGAACACTAAGTGACTCTGGCAGATCATTAGAGGAGC
TTGTGTCTAGTTCTAATTCCCTGAAATACAACCTGGGCTT
CCCAGCTAGTAATGATCCTACTCCAGAAACACTCAAAAAC
TACCTAGATGCTCAGTATTATGGCGAGATCGGTCTTGGCA
CTCCTGTCCAGACCTTCACTGTGGTGTTTGACACTGGATC
CTCCAACCTGTGGGTACCTTCAGTCCACTGTTCCCTGACT
GACATCGCCTGCTTCTGTACATGCGTCATCTGCTTAACAG
TTTTCAGAGTGGGATTTACCAACATTGGAGTGCAAAATGA
AGATGCGCTGTCCTTCGGCTTGCCTTAGAAAATGTGCTTC
ATCACAAGTACAATGGGGGCAAATCAAGCACCTATGTGAA
GAATGGGACTCAATTTGCCATCCAGTATGGATCAGGAAGT
TTGTCCGGGTATCTCAGCCAGGACACCTGCACGATTGGAG
ATATTGCAGTTGAAAAGCAGATATTTGGAGAAGCTATCAA
GCAGCCAGGAGTGGCCTTCATTGCTGCCAAGTTTGACGGT
ATTCTCGGGATGGCCTATCCTCGCATCGCTGTCGATGGG

OTTDART00000049133 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000049133|OTTDARG00000034680|ZDB-GENE-010131-8 ctsd|OTTDARP00000038558 ctsd-002 LG_ BX649507.3 Danio rerio protein_coding KNOWN, 799 bp
TGTGTCAGCTGACTGTGGCTGTTTGTCCTACATATTAGAC
CGCACAACAATAACATCCCCACAGCGATACTGCTCTCATT
ATCGTTAACTGGTCCTGAGGGCTCGCCAACATGAGAATCG
CCTTTTTGCTGCTCGTTGTTGCCTTTTTCTGCACGTCCGA
CGCGATTGTCCGGATACCACTAAAGAAGTTTCGAACCCTC
AGACGAACACTAAGTGACTCTGGCAGATCATTAGAGGAGC
TTGTGTCTAGTTCTAATTCCCTGAAATACAACCTGGGCTT
CCCAGCTAGTAATGATCCTACTCCAGAAACACTCAAAAAC
TACCTAGATGCTCAGTATTATGGCGAGATCGGTCTTGGCA
CTCCTGTCCAGACCTTCACTGTGGTGTTTGACACTGGATC
CTCCAACCTGTGGGTACCTTCAGTCCACTGTTCCCTGACT
GACATCGCCTGCTTCTGTACATGCGTCATCTGCTTAACAG
TTTTCAGAGTGGGATTTACCAACATTGGAGTGCAAAATGA
AGATGCGCTGTCCTTCGGCTTGCCTTAGAAAATGTGCTTC
ATCACAAGTACAATGGGGGCAAATCAAGCACCTATGTGAA
GAATGGGACTCAATTTGCCATCCAGTATGGATCAGGAAGT
TTGTCCGGGTATCTCAGCCAGGACACCTGCACGATTGGAG
ATATTGCAGTTGAAAAGCAGATATTTGGAGAAGCTATCAA
GCAGCCAGGAGTGGCCTTCATTGCTGCCAAGTTTGACGGT
ATTCTCGGGATGGCCTATCCTCGCATCGCTGTCGATGGG

Related Transcripts

Transcripts related to ctsd

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ctsd-202	Ensembl	799 nt
mRNA	ctsd-201 (1) Ensembl	Ensembl	1,784 nt	Select Tool
ncRNA	ctsd-003 (1) Ensembl	Ensembl	635 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations