Transcript

sugt1-202

ID

ZDB-TSCRIPT-110325-1114

Name

sugt1-202 Nomenclature History

Previous Names

sgut1-002
ch211-278i5.3-002
zgc:103668-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

sugt1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000164984 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000164984.2|gene_biotype:protein_coding|ENSDARG00000100083.2 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:1:27977370:28001937:1
TTGACAGGCCCAATTATTTACTTCCTTTAACGCCGCTGTT
CCCTCTCGAACTTTCTGCGGTTTCAGACGAAGTACGAAGT
ACGAAGAGTGGACCCATGGCAACTTGCGGGCGTTACTCTG
ACAGTTTCATAGATGAGGATCCTAGGAGGGCCCTTGAGAA
GCAATTGATGATGCCAAGAAAGCCCAAGACCTGCAGCCAG
GACTAGCACTTCCCTTTCTAAGAATAGGAATTGCAGAGTA
TCACCTACATAACTTTGTCGCTGCTCATCAGGCCCTCACA
GCAGGAAGAGACCTTGACAGTTCTGTTGAAGAATTTCAAA
CATGGATGCAGCACTGTGAAACTGAAATGGCGACACACAT
TCCAAACAAAACTTCAGATTTGCAAACTACAACCCATGTC
AAACATGATTGGTACCAGACAGAGTCTCAAGTTGCAGTTA
CCATCATGGTAAAAAATGCCAAGAAGGAGGGTGTGATTGT
CAGCTTTGGCGAAAGGGAGTTGACCGCTGTGGTAAAGCTT
CCATCAGGAGAGGATTATTGTCTGAAGGTTCATCTTCTTC
ATCCTATTGTCCCACAGCAGAGCACATACAAGATCCTTTC
AACCAAGGTATGATTAAAACATGCTTGTTTATATTGTGGG

OTTDART00000048249 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000048249|OTTDARG00000022801|ZDB-GENE-041114-56 sgut1|OTTDARP00000037868 CH211-278I5.3-002 LG_ CU915815.13 Danio rerio protein_coding KNOWN, 640 bp
TTGACAGGCCCAATTATTTACTTCCTTTAACGCCGCTGTT
CCCTCTCGAACTTTCTGCGGTTTCAGACGAAGTACGAAGT
ACGAAGAGTGGACCCATGGCAACTTGCGGGCGTTACTCTG
ACAGTTTCATAGATGAGGATCCTAGGAGGGCCCTTGAGAA
GCAATTGATGATGCCAAGAAAGCCCAAGACCTGCAGCCAG
GACTAGCACTTCCCTTTCTAAGAATAGGAATTGCAGAGTA
TCACCTACATAACTTTGTCGCTGCTCATCAGGCCCTCACA
GCAGGAAGAGACCTTGACAGTTCTGTTGAAGAATTTCAAA
CATGGATGCAGCACTGTGAAACTGAAATGGCGACACACAT
TCCAAACAAAACTTCAGATTTGCAAACTACAACCCATGTC
AAACATGATTGGTACCAGACAGAGTCTCAAGTTGCAGTTA
CCATCATGGTAAAAAATGCCAAGAAGGAGGGTGTGATTGT
CAGCTTTGGCGAAAGGGAGTTGACCGCTGTGGTAAAGCTT
CCATCAGGAGAGGATTATTGTCTGAAGGTTCATCTTCTTC
ATCCTATTGTCCCACAGCAGAGCACATACAAGATCCTTTC
AACCAAGGTATGATTAAAACATGCTTGTTTATATTGTGGG

Related Transcripts

Transcripts related to sugt1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sugt1-202	Ensembl	640 nt
mRNA	sugt1-203 (1) Ensembl	Ensembl	1,580 nt	Select Tool ZFIN BLAST
mRNA	sugt1-205 (1) Ensembl	Ensembl	2,557 nt	Select Tool ZFIN BLAST
ncRNA	sgut1-003 (1) Ensembl	Ensembl	668 nt	Select Tool ZFIN BLAST
ncRNA	sgut1-004 (1) Ensembl	Ensembl	633 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations