Transcript

aup1-202

ID

ZDB-TSCRIPT-100915-552

Name

aup1-202 Nomenclature History

Previous Names

aup1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

aup1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000140260 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000140260.3|gene_biotype:protein_coding|ENSDARG00000092609.4 transcript_biotype:nonsense_mediated_decay gene_symbol:aup1 cdna chromosome:GRCz11:14:5835158:5852665:1
ATCAGCCGCGTCTCAACATGGCGAAAAACAGCACAGGCTA
ATAGCGGCTAGCGTTTCTCCCCCCTCACCTTCCGTTTAAT
CCCGAGGAATAGTATGCAGCAGCCTTTGAAAATATCCCAG
AAAGATTTTAAATAATGGAAACGCGGGGGATTGAGCAGAT
GTTCGACTTCCAGCGGTTACCAAACGATCGCTTCATCCTG
CTGCTGCTGTTGCTGTACGCCCCTGTCGGCTTCTGTTTGA
TGCTACTGCGAATATTTATTGGTGTCCATGTGTTTCTAGT
GAGCTGTGCATTACCTGATAGTATTGTCAGAAGCCACTGC
TGGAGGGCCCTGTGGGGTTCCTGTGCTGGGCAAGGGGTTT
TATGGAGCTGGGTCAGGGTGTAGGGAGCAGGACGGAGCTC
ACGGAGACCCTCCACAGGTATTGCTCATCTCCTGACACTT
TACCCCTCCTGCTCTTCCCAGAGGAGGACACCACCAACGG
CCGGACCGGCCTCCTCAAGTTCAGCTCATGGCCTTTCTCT
GTGTCTGACTCTATTCAGCCTGTGGCACTGCTGGTGAAGA
GGCCTTTCATCGCTGTGAGTACACCAGAATCGTCATGGCT
GACGGAGCTGCTGTGGACCTTTTTTGTACCGTTCACAGTG
TACCATGTAAGATGGCTTCCACCTTTGTCTAAAGAAGATG
GTGAAACACATCAAGAATTTGCCAGCAAAGTCCAAGGGCT
ACTGGCCACGGAGCTGGGTGTGATCTCAACGCAGATCACC
AAAGCAGACAAAGCTGAACACATCAAAAGAAAAAGACACA
GCGCCCCTCAGACTGCACATTCAAGTAAGAACGGATTCAA
TGATTTGGGTGCCAGACCTCGCACA

OTTDART00000043992 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043992|OTTDARG00000031593|ZDB-GENE-030131-3375 aup1|OTTDARP00000038858 aup1-003 LG_ FP085432.10 Danio rerio protein_coding KNOWN, 865 bp
ATCAGCCGCGTCTCAACATGGCGAAAAACAGCACAGGCTA
ATAGCGGCTAGCGTTTCTCCCCCCTCACCTTCCGTTTAAT
CCCGAGGAATAGTATGCAGCAGCCTTTGAAAATATCCCAG
AAAGATTTTAAATAATGGAAACGCGGGGGATTGAGCAGAT
GTTCGACTTCCAGCGGTTACCAAACGATCGCTTCATCCTG
CTGCTGCTGTTGCTGTACGCCCCTGTCGGCTTCTGTTTGA
TGCTACTGCGAATATTTATTGGTGTCCATGTGTTTCTAGT
GAGCTGTGCATTACCTGATAGTATTGTCAGAAGCCACTGC
TGGAGGGCCCTGTGGGGTTCCTGTGCTGGGCAAGGGGTTT
TATGGAGCTGGGTCAGGGTGTAGGGAGCAGGACGGAGCTC
ACGGAGACCCTCCACAGGTATTGCTCATCTCCTGACACTT
TACCCCTCCTGCTCTTCCCAGAGGAGGACACCACCAACGG
CCGGACCGGCCTCCTCAAGTTCAGCTCATGGCCTTTCTCT
GTGTCTGACTCTATTCAGCCTGTGGCACTGCTGGTGAAGA
GGCCTTTCATCGCTGTGAGTACACCAGAATCGTCATGGCT
GACGGAGCTGCTGTGGACCTTTTTTGTACCGTTCACAGTG
TACCATGTAAGATGGCTTCCACCTTTGTCTAAAGAAGATG
GTGAAACACATCAAGAATTTGCCAGCAAAGTCCAAGGGCT
ACTGGCCACGGAGCTGGGTGTGATCTCAACGCAGATCACC
AAAGCAGACAAAGCTGAACACATCAAAAGAAAAAGACACA
GCGCCCCTCAGACTGCACATTCAAGTAAGAACGGATTCAA
TGATTTGGGTGCCAGACCTCGCACA

Related Transcripts

Transcripts related to aup1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	aup1-202	Ensembl	865 nt
mRNA	aup1-201 (1) Ensembl	Ensembl	1,866 nt	Select Tool
ncRNA	aup1-004 (1) Ensembl	Ensembl	879 nt	Select Tool
ncRNA	aup1-005 (1) Ensembl	Ensembl	455 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations