Transcript

havcr1-005

ID

ZDB-TSCRIPT-091110-1745

Name

havcr1-005 Nomenclature History

Previous Names

dkey-222k23.3-005
dkey-277m11.2-002
ottdart00000043604
zgc:92647-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

havcr1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142625 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142625.2|gene_biotype:protein_coding|ENSDARG00000040178.6 transcript_biotype:retained_intron gene_symbol:havcr1 cdna chromosome:GRCz11:21:29106989:29110171:-1
GTGCATTGCTTGCAGAGAGAGTGACACATTTTCATCATGA
CTGATCTTCACAGCTGGTTCCTCTCATCATGGATTCTCTG
CTGCCTGACGATTTGCAGATGCAGCGACATTATTGTACAG
AGTTTCGAGGGTGACAATGTGACTTTGCCATGTAAATATG
ACAGCAGATATCATGGCAAATGTGAGATATGCTGGATGAG
AGGAGATATTCCCAGTAGGGGCTGTGGCGAAGAAATTATT
GCAAGTGATGGAGATAAAGTGTCGACGAGGAATTCAGATA
GATATGATCTGGCTGGACCAATCCAGCATGGAGATGTGTC
TCTGACTATTTTTAACATTGATAAAACAGACTCTGGAAAA
TATGGATGCCGTGTACACGTGCCTGGATGGTTTAATGATG
AGAAGTATTACGTCCATTTGATCGTTGATGATGCCATTAT
TCCAACCACCCTGGAAACTACATCCATGTCAAGCAGCACA
TCCGAGCATGAAACCACAGGAGTTTACACCACTGCCATGA
CAGAGGGTACTTAAGTGTGTTTATATGTGCTTTCATAATG
TCTCTGTCAATCTGTTACGCCTGAATGATGGAAACAATCT
AAAGATAAATTTTATTAGTGATTACGATAATAGTTTGGCA
TGATCTGTCATCATTCAGTCATCACAGATGCAATCAGCGC
TGTGTAAAGTCAGCAGTTTTCTAACATTCGCTGCTCATGT
GAGAGTTTCAACATTTAAAAAGGAACATTTTACATCCTGT
TTCAAAGCACCTGCTACAACCCCACCAGAC

OTTDART00000043604 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043604|OTTDARG00000031313|ZDB-GENE-040718-131 havcr1|no_translation DKEY-222K23.3-005 LG_ CU463029.6 Danio rerio protein_coding KNOWN, 790 bp
GTGCATTGCTTGCAGAGAGAGTGACACATTTTCATCATGA
CTGATCTTCACAGCTGGTTCCTCTCATCATGGATTCTCTG
CTGCCTGACGATTTGCAGATGCAGCGACATTATTGTACAG
AGTTTCGAGGGTGACAATGTGACTTTGCCATGTAAATATG
ACAGCAGATATCATGGCAAATGTGAGATATGCTGGATGAG
AGGAGATATTCCCAGTAGGGGCTGTGGCGAAGAAATTATT
GCAAGTGATGGAGATAAAGTGTCGACGAGGAATTCAGATA
GATATGATCTGGCTGGACCAATCCAGCATGGAGATGTGTC
TCTGACTATTTTTAACATTGATAAAACAGACTCTGGAAAA
TATGGATGCCGTGTACACGTGCCTGGATGGTTTAATGATG
AGAAGTATTACGTCCATTTGATCGTTGATGATGCCATTAT
TCCAACCACCCTGGAAACTACATCCATGTCAAGCAGCACA
TCCGAGCATGAAACCACAGGAGTTTACACCACTGCCATGA
CAGAGGGTACTTAAGTGTGTTTATATGTGCTTTCATAATG
TCTCTGTCAATCTGTTACGCCTGAATGATGGAAACAATCT
AAAGATAAATTTTATTAGTGATTACGATAATAGTTTGGCA
TGATCTGTCATCATTCAGTCATCACAGATGCAATCAGCGC
TGTGTAAAGTCAGCAGTTTTCTAACATTCGCTGCTCATGT
GAGAGTTTCAACATTTAAAAAGGAACATTTTACATCCTGT
TTCAAAGCACCTGCTACAACCCCACCAGAC

Related Transcripts

Transcripts related to havcr1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	havcr1-201 (1) Ensembl	Ensembl	1,004 nt	Select Tool
mRNA	havcr1-202 (1) Ensembl	Ensembl	917 nt	Select Tool
mRNA	havcr1-203 (1) Ensembl	Ensembl	910 nt	Select Tool
mRNA	havcr1-204 (1) Ensembl	Ensembl	840 nt	Select Tool
mRNA	havcr1-206 (1) Ensembl	Ensembl	3,037 nt	Select Tool ZFIN BLAST
ncRNA	havcr1-005	Ensembl	790 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations