ZFIN Transcript: prom1a-201

Sequence

OTTDART00000027096 (1) [ Show ] (double-click sequence to select)

>tpe|OTTDART00000027096|OTTDARG00000021335|ZDB-GENE-030131-1577 prom1a|OTTDARP00000022208 proml1-001 LG_none BX004823.23,BX088536.8 Danio rerio protein_coding KNOWN, 5946 bp
AGCGGAGCATCAGACTGACTGACCGGCGGACAGACACCGA
GCCCCGCCGTGAACCTGCAGGAGAAGCCGCTCTCCTGGGG
GAGCATGATCATCATGACTCGCTCGCCGGACAGCAGGACT
TGAGACCTGCGGTTTGTCAGTGATTGTGTCTTACTGAACA
CCCAGAATTTCCTCCACTTCCATCATCTGGATTTGCTTCA
ACACTAGAACTAATCATGCTTTGGAAAACGGCACTGATTT
TTCTGTGCTGGGGCTTGACGTCCGGGGAGCTACAGAACGG
GCTGTCCGCCACTCCTGCTGCTCCAGCGCGGAGAACTTTG
GATTTCGGCTTCGTCCCCTCCGGAGTTTACGATACTGTTG
CCTATTATGAGCCTGGAGCCATTGGGATTTTATTTAACAT
GATGCACGCTTTCCTCTTTGTGGTTCAGCCCAACCCGTTT
CCTGAAGATCTCGTCATTAGCGCGGCAAAGGATAAATTTG
GAGCCATACAGTCCGAGTACCAGAAGGTAATATATTATGA
GCTTGGGTTTGTGGTGTGTGCGGCGCTGGGCCTGCTGTTC
ACCGTGCTGCTGCCGCTGGTCGGGCTTCTCTTCTGTTTGT
GCCGCTGCTGTGATAACTGTGGAGGAGAGATGCACCAGAG
ACAGAGGAAGAACGCAGACTGCCTTCGAGGACTGCTGACC
ACACTCTTACTCACCACCACCTTCATCATCACGGCTGGGG
TCCTTTGTGCTTATGCAGCCAATCAGAACCTGAGTTCGCA
GCTGAAGGGCATGAGGAGGCTGGTGAAGAGTAACCTGAAA
GACCTGCACACCTTCGCCAATCAGACGCCTGCACAAATTG
ATTACCTGATCTCTCGCTACGGCACCGTGAAGGAGCAGGT
GCTGCATGATCTGGAGAATGTAGGTGTGATCTTGGGGGGA
AGGATACATGAGGAGCTGGGCAAAGAGGTGAAGCCTGCTC
TCGATGCCACTCTCAGCATGACCGGAACAATGCGAGACAC
TAAGGACGCTCTAGAGAATGTGAGTCTGACCTTGGAGACT
CTGCAGGAAGGAACAGTCAAACTGCAGGCAAACCTGAGTG
TGGTGCGCAACAGCCTGAGAAACGCCCTGAACGATCCCGT
CTGTGTGGATGCTCCAGCACCGGAGATCTGTCGAAACATA
CGCAACTCCATTCCCAAGCTCGAAATCGCAGCCAACTACT
CATCGTTGCCTGATGTGACCGACCAGTTAAATAAGGTGAA
TGACGTTCTGAAGACGGATCTCAGTCAGATTGTGGCAAAG
GGGATTGCATCTTTTAATGACACTCCTGCTATGGTAACCG
CTCAAACTCGAAATATTGTTGAAGGGGTGAAGGTGTTGCT
TGATGACATTGGAAATAACATCACCTCTTTCAGCAAGATG
TTGCCAGTTCACAGCTCTCTGGCCAACTTCACCAGAATGA
TCTCTCACACACACTCGCAGATCGAGGACATCTACCCGCA
GATTGATCAGATGGATTTCTACAGGTGGATCGGTTGCATT
ACCCTGTGCTGTATGATTGTGCTCATCCTCACCTTCAATT
TTCTGGGTCTGTTGTGTGGTATTCTGGGATTCGACAGACA
CGCTTCCCCAACCACACGTGGCTGTGTCTCCAACACAGGA
GGGAACTTTCTCATGGCCGGTGTGGGCTTCAGCTTCCTGT
TCTCCTGGGTGCTCATGGGAGTCATAACAGCTTTGTTCCT
GGCAGGAGGCAATCTGGAGAAGCTCGTGTGTGAGCCCTTC
CAAACACGACAGCTCTTCAAGGTGTTAGATACTCCATACC
TGGTCAACTCTGCTTGGAGAAACTTTATACCAGGATACCT
GTACAATGACCCAGAGATGGACCTTACAGCATATTCTCTC
TACAGTAACTGTAAGGACAACAGAGGGATTTACTCAGCTC
TTCATCTGGACAGAATCTTCAACATCTCATCCTTCTTTAA
CACCAGTGTTTACTCCAAGGATGTGTCCAGGAAGTTTGAA
GGACTGAAGGTGGATTTACGGGGCATCATTCTTCTTGAGT
CTGAAGGCAAAGTCAACCTCAACAACTTCTCTGAAACTGG
CATTAATGAGATCGACTTTGCTGCCTATTTAGAGGAGGTT
AATAAAGGAGTGACTCGAATAGATCTCATTGATTTCGCCA
ATCAACTCGATGCTCAAGCTGATCAGTTGTCTAAAGGGAC
GTTACAGACTTCATTAAAGGGACATGCGAACACTATAAGG
CAGATCCACATCCAACAAGTCGTCCCACTGGAGCAGTCCA
TGAGCACACTTAATCAGAGCATCAGACTTCTGGAAAGGAC
GTCCTCAGATCTGCCTCTCCGAGTTGAAGATGTTCTTAAA
GCCGTTGATGATGCCCAGAACCTGATTTCCTACAATGCAA
CATTTGTGATCAATCAGGAAACTGAGAAATACAAGCAGAA
CATCATTGGCTATTTTAAGCAGTACATAGACTGGATCAGG
ACATCTCTGGCTCTGGAGGTCGCCACCTGTAAACCACTCA
GCAACATTGTGGACACGGTGGAGATCCTGGGCTGCGGTTT
CTTGCTGGATTCAATGAACACTTTCTGGTTTGGACTGGGC
TGCTGCACACTCTTTCTGCTCCCTAGCATTATCCTGTCTG
TCAAGCTCGCCAAGTTTTACCGCAGAATGGACACAGAGGA
TGTTTATGACGACGATATTGGACACTGGAATTGAATCTTT
GTGGAATACTCTCCATGTTGAACAGCAGGCTCAGCTCAGA
CTGACGACATTAAGAAAAGGAAACTCACATACTTGAAGCT
GGGACCTGTTGTCTGTGTTTCTCCATAACACCAATCGAGA
CTTTCTTTAAAATGTCTTGTTGTTTTTGACTGTTTTGCAC
GTTAATCATTATTAGTACTGTCCCTCAACGAGCTCTGACA
TCACTTCTTGTCACAGTCAGAGAGGCTTCACAGTATATGG
CTGTTTAACTACTACATGTGTCTTTGTTTACAGTCGTTGA
GAAATCACGTGTGACGGGCATAACAATGCTTCAACTGCTG
CATTCTTGTGTATTTTTTCGTTCCTTTTTATAGTGCTTTT
TAACATTGTGGAGAATTGAACACGTCCACGTCGAGTCCAC
TGAGAGGCCGAAGGGATTTTTATTGAAACAGAGCAAGCCA
GCCACCCGTGAGCCGCAAATATTACACATAAACAACAGTG
TAGATGGAAAACATAGCAGCTAGTGCTAGTTCAGTACTGA
CAAATGTTGTTAAGCCATTACAAGGGTGAATGCTTTGTTG
CCTTTTTCAGATTTGTAGCTTGTGGTGCAAGTCGCAAGAG
CAGGTGTTGGATTAATTTCACCTATAAATCACTAAAGTAC
ATTTAACATTGATTTCTGGGTAATGCTTCAATGAGCATAT
CTGATTATGCTCATTTTTGTACTCTTGAGCATTTATGGTT
AATACGGCGTTAGGAGGATCTTGGTAACAGTATGTGCGTA
GTTGTTCTGAGGATACAAGTGCTGTTAATGATGTTCCGCT
TTAGGGGTGTGCGATATTTATTACAGTATATATTATAATA
CCGGAATTGTGGTTTTAACTATGACGTTGGCACTAATATT
GTAACTAAACAAAGCAGAAACACGTTATGAGAATCAGTTT
CAGTTCAGTTTCCTTTAATTATGTCTTTCAAAACATCAAT
GCAGAACGAAATTACATTGCACCAACATCCAGCAAGAACA
ACAAAATACATCAGAAATCAACATAATAACATAATAAATA
AGCTTTTGTAATTTTTAAATTATATAAAAATATAGTTAAT
TATAAAATATAAACCAAGTTAAAAACACAGACAGGAATTA
ATAATACTTAAATACGTATTGAGACTCCAGAGTCTTTGAA
TCCATGATGAATTATAGTGTCGATTAAATAGAATTTAAGT
AATGAAATCAAAATAAATTGGTGTATTTTTGATGTTTGTT
ATTGGCAATATTACACAAGAGTGCCGTTTCCTGAATATAA
GCACTTCAGCATGATTGCAGATACTGGTTTTGTTTAACAA
TTTTTCTTTTAAAGTTGATATTAAGTTACGTTTTACACAT
AAAATTGTCCCATTTTCAGTTCTGCCAATAAAAACAGTTT
CAAGCTAAACCATATTTGCAGCAACAATGCAGTGTTTAGT
TTCTACATGAATCTGTTTTTGAAATGATTATGTCAAGGAT
TCATTAATGACAGTCACTAGCTTTGTTTCTGAATGAATCA
CTTGAATAAATGAATCAGTGACTGCATCCAAAATCACATG
CTGTTCTTTGCGACTGCTACTGATTTTGTTTACAATTTTT
CTTTTAAAGTTGATATTGAGTTACATTCTACATACAATAT
TGTTAGTTTTTCAGTTTCGCCAATGAAAACAGTTCCCAAC
TAAACCATATTTGCAGCAATAATGCAGTGTTTAGTTGCTA
AACGAATTAAGTCAGTGATTCGTTAAGTCTGTGATTCATT
AATGACAGTCACTAGCTTTGTTTTGAATGAATCATCATTT
TTGAATGAATCACTTGAATGAATGAACCAGTTACTGCATC
CAAAATCACATGCTGTTCTTTGCGACTGCTAATAAAGGAT
GTTATTGGCCATTTAAATGTAATCTTGATGTACTAAATTC
GCCATATTGAGAATTTCATCTGAGACTGAATCCTTGATAA
ATTATAGTGTCATTCGAATAGAACTCAAGTTATGAAATCA
AAATAAATTGGTGCATTTTTTATGTTTGTTATTGGCAATA
TTACACAAGAGTGCCATTTCCTGAATATAAGCACATCAGC
ATGATTGCAAATACTGATTTTGTTTAACAATTTTCTTTTA
AAGTTGATATTGAGTTACATTTTACACACAATATTGTCCG
CTTTTTAGTTTTCGCCAATAAAAACAGTTTCAAGCTAAAC
CATATTTGCAGCAATAATGCAGTGTTTAGTTTCTAAATTA
ATACATTTTTGAGATAATTAAGTCAGGGATTAATGACAGT
CACTAGCTTTGTTTCTGAATGAATCATAATTTTTGAATGA
ATCACTTGAATGAATGAACCAGTTACTGCATCCAAAATCA
CATGCTCTTCTAGAGTGGCTAATTATTTTGATGAAGTACT
TTGTGACTGCTAATAAAGTATGTATAGGCAATATAAATAT
AATCTTGACGTACTATATTCGCCATATTGAGAATTTCGTT
GTGCTGTTTTTGGCCTACCTGTAGGGAGGTATGCAATTTT
GGATACAGCCAATGAATCACTCCTAATGACAGGGAATTGT
CACCACCTACAGGCAGTTTTAGTATCCTGAACAAAGCTAA
ACTATTCAAAACACCAGCGTAAACATGTTTGTTTTAACAT
TGCACACCCCTATCTCGGTTCTTTATTTCGTTGACTGCAC
TAAACACACTGTTGAATTGCTTTTTGACACCAAATCTGGT
TTCATCGTAGCTCTCAGGTTTTAGGGCTTTTTGTTTACGT
GATACAACAATGCTTGTTGACGTCTTTAGTCGACTTTAAA
GGAGTGAATGTACCTAAAAGACATTTGCTTGTACGAGAGC
CCATTTACAACCACTTTTACAGAGCCTGTTTAACGCTGTC
ATAGTCATGGACTATTGTTTCCGCCAAATATTTCAGCTGT
TTAGAGACATAACGTCAGGTGCTACATGTTTTTTGCTCAG
ATCCTTCACTCATTTTGTATATGACAGTGTTATTAGGGCC
TCAGGTAAAATGTTGTACTTGATTTCTTTTCTAGAAAAGT
CCCTTCACCTCACAGTCTCACTGTTTTTGCCATACCACGG
GTAGCATGCGCATACTTAGTGTTCAAGCTTGCTCAAGATG
TTTAGTTGTGGTGGGCCTGGTCGTCACTGCCATTGGTTTT
TTCAATCCGTGTGGTTAGGCTGGCTAAAACTGTAAAATAT
TGTGAATAAAATTTCAGATGAAAATA

Related Transcripts

Transcripts related to prom1a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	prom1a-204 (1) Ensembl	Ensembl	3,051 nt	Select Tool
aberrant processed transcript	prom1a-208 (1) Ensembl	Ensembl	3,069 nt	Select Tool
mRNA	prom1a-201	Ensembl	5,946 nt
mRNA	prom1a-202 (1) Ensembl	Ensembl	2,948 nt	Select Tool
mRNA	prom1a-205 (1) Ensembl	Ensembl	3,625 nt	Select Tool ZFIN BLAST
mRNA	prom1a-206 (1) Ensembl	Ensembl	2,972 nt	Select Tool
mRNA	prom1a-207 (1) Ensembl	Ensembl	3,616 nt	Select Tool ZFIN BLAST
ncRNA	prom1a-002 (1) Ensembl	Ensembl	516 nt	Select Tool
ncRNA	prom1a-004 (1) Ensembl	Ensembl	2,670 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations