Transcript

tnfaip1-202

ID

ZDB-TSCRIPT-090929-8682

Name

tnfaip1-202 Nomenclature History

Previous Names

tnfaip1-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

tnfaip1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000136520 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000136520.2|gene_biotype:protein_coding|ENSDARG00000041565.8 transcript_biotype:nonsense_mediated_decay gene_symbol:tnfaip1 cdna chromosome:GRCz11:15:20529280:20535484:1
TTGTTAGCCATCGCCCTGAAGGTAGATGTGAAAGGTATTT
TCCCTGTTTTTAAATGGTCTGATAGACCTGTTTATGCGTT
TCTTTTTCAAATATGGTTGAAGTTAAACAGCGGAGTTGAA
CAACTGTCGACTTCAGTTACTCGCCGACGAGTTATACTGC
GGCAGAGCGGTTAATGTGTAGCATGTAGGTTTGGCATCAC
GATCAGCCTGGCCAGCAGCATTCACCACGGCAGGGGAAAT
CAGACCCATCGTGTGCAGGGTGGTTATCTACCTACAGAGG
GACATGTCAGGAGAGAGCTGCCTGCACCAGCTTCAGCCAC
ACACCGGGCCCATCCTGCCAGTCTCTTCAGTGGGCTGCCC
CAAGACTAACACCTGCACCTACCGTGGTGTGACCGGAAAT
AAGTACGTTCAGCTCAATGTTGGTGGAAATCTGTACTACT
CCACACTGCAGGTGCTCACTAGACAGGACACCCTGCTGAG
ATCCATGTTCAGCGGCAAGATGGAGGTGCTCACAGATAAG
GAAGGTTGGATCCTAATAGATCGCTGTGGGAAACACTTTG
GCTCTGTGTGTAATCCCGGTCATAACATCTCCTAAAGAGG
AGGAGAGACTGATACAAGCATGTGTGAGGCCTGTTGTAAA
GCTTCTATACAATCGAGGAAATAACAAATATTCCTATACA
AGCAACTCTGATGACAACCTGCTCAAGAATATCGAGCTGT
TTGAGAAGCTGTCTCTGAGCTACAGCGGTCGTGTGCTCTT
CATTAAAGATGTAATTGGAGATGAAATTTGCTGCTGGTCT
TTTTACGGACAGCACCGCAAACTTGCT

OTTDART00000025983 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000025983|OTTDARG00000020694|ZDB-GENE-030131-5610 tnfaip1|OTTDARP00000038122 tnfaip1-004 LG_ CR853297.8 Danio rerio protein_coding KNOWN, 827 bp
TTGTTAGCCATCGCCCTGAAGGTAGATGTGAAAGGTATTT
TCCCTGTTTTTAAATGGTCTGATAGACCTGTTTATGCGTT
TCTTTTTCAAATATGGTTGAAGTTAAACAGCGGAGTTGAA
CAACTGTCGACTTCAGTTACTCGCCGACGAGTTATACTGC
GGCAGAGCGGTTAATGTGTAGCATGTAGGTTTGGCATCAC
GATCAGCCTGGCCAGCAGCATTCACCACGGCAGGGGAAAT
CAGACCCATCGTGTGCAGGGTGGTTATCTACCTACAGAGG
GACATGTCAGGAGAGAGCTGCCTGCACCAGCTTCAGCCAC
ACACCGGGCCCATCCTGCCAGTCTCTTCAGTGGGCTGCCC
CAAGACTAACACCTGCACCTACCGTGGTGTGACCGGAAAT
AAGTACGTTCAGCTCAATGTTGGTGGAAATCTGTACTACT
CCACACTGCAGGTGCTCACTAGACAGGACACCCTGCTGAG
ATCCATGTTCAGCGGCAAGATGGAGGTGCTCACAGATAAG
GAAGGTTGGATCCTAATAGATCGCTGTGGGAAACACTTTG
GCTCTGTGTGTAATCCCGGTCATAACATCTCCTAAAGAGG
AGGAGAGACTGATACAAGCATGTGTGAGGCCTGTTGTAAA
GCTTCTATACAATCGAGGAAATAACAAATATTCCTATACA
AGCAACTCTGATGACAACCTGCTCAAGAATATCGAGCTGT
TTGAGAAGCTGTCTCTGAGCTACAGCGGTCGTGTGCTCTT
CATTAAAGATGTAATTGGAGATGAAATTTGCTGCTGGTCT
TTTTACGGACAGCACCGCAAACTTGCT

Related Transcripts

Transcripts related to tnfaip1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tnfaip1-202	Ensembl	827 nt
mRNA	tnfaip1-201 (1) Ensembl	Ensembl	1,928 nt	Select Tool
mRNA	tnfaip1-203 (1) Ensembl	Ensembl	765 nt	Select Tool
mRNA	tnfaip1-204 (1) Ensembl	Ensembl	873 nt	Select Tool
mRNA	tnfaip1-205 (1) Ensembl	Ensembl	994 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations