Transcript

prpf38b-004

ID

ZDB-TSCRIPT-090929-7672

Name

prpf38b-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

prpf38b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000135665 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000135665.2|gene_biotype:protein_coding|ENSDARG00000053101.6 transcript_biotype:processed_transcript gene_symbol:prpf38b cdna chromosome:GRCz11:2:45659935:45663902:-1
CGGTGTAACAGAGCGCTTCGCGTGCGTCTGCCTCCAACCC
AGAGAATAAGAAACAAAACGACCTGAAAACACACTTGAAT
GAATTAAGAGACGTCGGTCCGCTTCTCGCGCACCTCGTCG
GACGCGTTCCTTCGCGATATTCGTTAAGGTTAACGACTAT
TTTTGTCCGTTTTCTCATTTAATGGCGTTGTGAAGGAACT
GCCATGGCGGGTAGTCAGCAGCAACAACAGCAGCAGGCCG
TGAGCAAACCGACCGGCGGGAAACACGGCAATAATTTGCC
ATTATGGGGCAACGAGAAGACTATGAACCTCAACCCTATG
ATTCTGACAAACGTGCTTTCTTCACCCTACTTCAAGGTCC
AGCTGTACGAGCTCAAGACGTACCACGAGGTGGTGGACGA
GATTTACTTCAAGGTCAACCATGTGGAGCCATGGGAAAAA
GGCAGCAGGAAGACAGCTGGGCAGACGGGAATGTGCGGAG
GGGTTCGAGGAGTCGGGACAGGTGGAATCGTGTCCACGGC
ATTTTGTCTGCTGTATAAACTGTTCACACTAAAGCTGACA
CGGAAACAAGTGATGGGTCTTATCACTCACTCCGATTCAC
CCTATATCAGGGCATTGGGCTTCATGTACATCAGGTATAC
TCAACCTCCTCCTGACTTGGTTGACTGGTATGATGAGTTC
CTTGACGACGAGGAGGTATGTCGCCACGGGTAATGCCTTC
ACCTCTCTCTTATTTCAAATGTACACAGTTATAACCAGAC
ATATCCAGGCTGAATGC

OTTDART00000024888 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000024888|OTTDARG00000020031|ZDB-GENE-040426-2878 prpf38b|no_translation prpf38b-004 LG_ CR450720.5 Danio rerio protein_coding KNOWN, 777 bp
CGGTGTAACAGAGCGCTTCGCGTGCGTCTGCCTCCAACCC
AGAGAATAAGAAACAAAACGACCTGAAAACACACTTGAAT
GAATTAAGAGACGTCGGTCCGCTTCTCGCGCACCTCGTCG
GACGCGTTCCTTCGCGATATTCGTTAAGGTTAACGACTAT
TTTTGTCCGTTTTCTCATTTAATGGCGTTGTGAAGGAACT
GCCATGGCGGGTAGTCAGCAGCAACAACAGCAGCAGGCCG
TGAGCAAACCGACCGGCGGGAAACACGGCAATAATTTGCC
ATTATGGGGCAACGAGAAGACTATGAACCTCAACCCTATG
ATTCTGACAAACGTGCTTTCTTCACCCTACTTCAAGGTCC
AGCTGTACGAGCTCAAGACGTACCACGAGGTGGTGGACGA
GATTTACTTCAAGGTCAACCATGTGGAGCCATGGGAAAAA
GGCAGCAGGAAGACAGCTGGGCAGACGGGAATGTGCGGAG
GGGTTCGAGGAGTCGGGACAGGTGGAATCGTGTCCACGGC
ATTTTGTCTGCTGTATAAACTGTTCACACTAAAGCTGACA
CGGAAACAAGTGATGGGTCTTATCACTCACTCCGATTCAC
CCTATATCAGGGCATTGGGCTTCATGTACATCAGGTATAC
TCAACCTCCTCCTGACTTGGTTGACTGGTATGATGAGTTC
CTTGACGACGAGGAGGTATGTCGCCACGGGTAATGCCTTC
ACCTCTCTCTTATTTCAAATGTACACAGTTATAACCAGAC
ATATCCAGGCTGAATGC

Related Transcripts

Transcripts related to prpf38b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	prpf38b-202 (1) Ensembl	Ensembl	1,229 nt	Select Tool ZFIN BLAST
mRNA	prpf38b-201 (1) Ensembl	Ensembl	2,188 nt	Select Tool ZFIN BLAST
ncRNA	prpf38b-003 (1) Ensembl	Ensembl	777 nt	Select Tool ZFIN BLAST
ncRNA	prpf38b-004	Ensembl	777 nt
ncRNA	prpf38b-005 (1) Ensembl	Ensembl	731 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations