Transcript

cyt1-202

ID

ZDB-TSCRIPT-090929-3574

Name

cyt1-202 Nomenclature History

Previous Names

cyt1-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

cyt1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000133032 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000133032.3|gene_biotype:protein_coding|ENSDARG00000092947.4 transcript_biotype:nonsense_mediated_decay gene_symbol:cyt1 cdna chromosome:GRCz11:19:5363394:5364639:-1
ACTCATCCGCTCACTCCTTCTCCAGGCAGAGCAGACGACG
ACAGCAAGACTCCTTCAAAATGATGTCTTCTTCATCCATC
CGCATGTCCTCAGGAGGATCTTCTCGCCTCTCTGTCGGTG
GTGGAGCCAGTCGTGTCTCAGGAGTGCGTGCTGGTAGTGT
CTATGGAGGAGCAGGAGGATCCGGTGTTCGCATCTCCAGT
TCTTCTGCTTCCAGATCCTACTCTGCTGGTGGGGGCGCAG
GATTTGGTGGTGGTGCTGGTGCGCAGCCTGGAGAAGGCCA
ATGCAGATCTTGAGCTGAAGATCCGCCAGTTCCTGGACAG
CAAGGCCACGCCTAATGCTCGTGACTACAGTGCCTACTAT
GCAACAATCAGTGACCTCCAGGCAAAGATCCTGCATGCTA
CTGGTGTAAATGGAGGCATCTACCTCAGCATTGACAATGC
CAAGCTGGCTGCAGATGACTTCAGAGTCAAGTATGAGAAT
GAGCTGAGCATGAGGCAGTCTGTGGAAGCAGACATTGTTG
GCTTGAGGAAGGTGCTGGATGAGCTCACAATGACCAGATC
TGACCTGGAGTTGCAGATCGAGGGTCTGAAAGAAGAACTG
ATCTTCCTCAAGAAGAACCACGAGGAGGAGCTCTTGGCAG
CACGCACCCAGATGAGTGGACAAGTCAATGTAGAGGTCGA
TGCAGCACCACAGGAAGACCTGACAAAGATCTTGGCTGAT
ATCCGTGAGCACTACGAGGCAGTTTCTGCCAAGAACCGTA
AAGATCTTGAGAGTTGGTTCCAGGCCA

OTTDART00000016886 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000016886|OTTDARG00000014151|ZDB-GENE-991008-6 cyt1|OTTDARP00000041848 cyt1-004 LG_ BX323079.7 Danio rerio protein_coding KNOWN, 787 bp
ACTCATCCGCTCACTCCTTCTCCAGGCAGAGCAGACGACG
ACAGCAAGACTCCTTCAAAATGATGTCTTCTTCATCCATC
CGCATGTCCTCAGGAGGATCTTCTCGCCTCTCTGTCGGTG
GTGGAGCCAGTCGTGTCTCAGGAGTGCGTGCTGGTAGTGT
CTATGGAGGAGCAGGAGGATCCGGTGTTCGCATCTCCAGT
TCTTCTGCTTCCAGATCCTACTCTGCTGGTGGGGGCGCAG
GATTTGGTGGTGGTGCTGGTGCGCAGCCTGGAGAAGGCCA
ATGCAGATCTTGAGCTGAAGATCCGCCAGTTCCTGGACAG
CAAGGCCACGCCTAATGCTCGTGACTACAGTGCCTACTAT
GCAACAATCAGTGACCTCCAGGCAAAGATCCTGCATGCTA
CTGGTGTAAATGGAGGCATCTACCTCAGCATTGACAATGC
CAAGCTGGCTGCAGATGACTTCAGAGTCAAGTATGAGAAT
GAGCTGAGCATGAGGCAGTCTGTGGAAGCAGACATTGTTG
GCTTGAGGAAGGTGCTGGATGAGCTCACAATGACCAGATC
TGACCTGGAGTTGCAGATCGAGGGTCTGAAAGAAGAACTG
ATCTTCCTCAAGAAGAACCACGAGGAGGAGCTCTTGGCAG
CACGCACCCAGATGAGTGGACAAGTCAATGTAGAGGTCGA
TGCAGCACCACAGGAAGACCTGACAAAGATCTTGGCTGAT
ATCCGTGAGCACTACGAGGCAGTTTCTGCCAAGAACCGTA
AAGATCTTGAGAGTTGGTTCCAGGCCA

Related Transcripts

Transcripts related to cyt1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cyt1-202	Ensembl	787 nt
mRNA	cyt1-201 (1) Ensembl	Ensembl	1,572 nt	Select Tool
ncRNA	ottdart00000016889 (1) Ensembl	Ensembl	1,663 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations