Transcript

ccnl1a-004

ID

ZDB-TSCRIPT-090929-3278

Name

ccnl1a-004 Nomenclature History

Previous Names

si:ch211-203b8.5-004

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ccnl1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000141027 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000141027.2|gene_biotype:protein_coding|ENSDARG00000055124.7 transcript_biotype:retained_intron gene_symbol:ccnl1a cdna chromosome:GRCz11:18:41520160:41526488:1
TTTGCATTGTGTTTCAAACCTCGTACATGCAGGTGAAGTT
ATAGGAAATGGCAATGTTGTGGTTCACCTTGTGTGTTGCA
GGAACTACATGAACGACAGCCTTCGCACTAATGTGTTTGT
GAGATTTCAAGCTGAGACCATCGCCTGTGCCTGCATTTAC
CTCGCTGCACGAGTGCTTCAGATATCGTTACCCTCTCGGC
CGATTTGGTACCTGCTGTTTGGTGCCACGGAGGAAGAGAT
CAAAGACATATGTACAACCACATTGAAGTTGTACACAAGA
AGAAAGCCAAATTACGATTTGCTGGAAAAGGAAGTGGACA
AGCGAAAGATGGCGATACAGGACGCCAAACTGAAGGCCAA
AGGACTGAATCCAGATGGCACCCCTGCTATCTGTTCATTT
GGTGGATTCTCTCCTGCATCCAAACCATCTTCACCTAATA
TAATGAAAACCGACGAGAAGTCTCCCAACCTTCAAACACT
CAAGGCAATGAAAAAAGAACCAGAAGATCGTCCTCAGGGG
TCTAAGAGCCCACACAATGGTCTCAGGAAGGACAGTAAAT
TGGGTCGCAACAGTAGAAGTGCTAGTCGTTCTCGCTCTCG
GACGAGATCCCGGACCAGATCACGTTCTCCCAGAAGACAT
TACAACAACAGACGCAGTCACTCAGGCACTTACAGCTCTC
GCTCGCGGAGCCGCTCTCACAGCCGCAGCCTGTCTCCACG
CCGGCACACCAACCACGGCCCTCCATCTCCGCTACTGCCA
CACTTAAAGTCAAAGCAGCGCTCGGACGACCTGCACCAGC
ACAGCAGACACAGCCACAAGAGGAAACGCTCTCGCAGCCG
CTCTCGATCCACCAGCAAACCTCGCGAGCGGGACAGAGAG
CGGGACCGAGAGCGCGAGCGGGACAGAAGCTCCTCAGATC
TGGCGAAGAAGCACAAACATGAGCGCAGCAGCGGCGGCGG
ACATCACCGCGACCGGCGGGAACGCTCACGGTCATATGAA
CGCTCTCATAAAAGCAAACACCACAGCAGCAGCCATTCGA
GCCACAGCCGCCACAGACGCTGAGTGTTTTCCTGTCACAT
CACGTCTGCCAGTGCGCTTGTATTCAGTTTAAGTGGTCGA
CGTTGACCTAGTCATCTGTTTTAATTAATTTGATTTTCTC
TTGTGTTATTTTGGAGTTTTAGTTTTAAACGTGGAAAGAA
TGCGAAGCTACATATTTACAGTGTAAAGATGGGTTCAATG
TTGAGGAAATATGAGAAATGCTTTGATTTATAAAAGCAAC
CTTTTTCAGACGGTGGGAAATCACTAGTTACATTAAAACA
ATTGGAGATTTTCAGGAACGATGGAGACTTTGCACAGGTT
CATGAATGAATAATTGAGAGGCTCTACTGGTGAAGAAAAT
TGGTTTGTCTGGAAATAGATCACATTTTTTTTACAGGGGA
TGCAGACTTTTTTTTCTTTTTTTTTCTTTTTTGGATCATG
GTGACTTTGTTACACTGGTTTTTAGTCTGCACGTCTTCAT
GTCTGATTTTTACTCAATAAAAAGTGACTTATTCCTACTG
TAAA

OTTDART00000016033 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000016033|OTTDARG00000013491|ZDB-GENE-050419-206 ccnl1a|no_translation CH211-203B8.5-004 LG_ BX950182.13 Danio rerio protein_coding KNOWN, 1564 bp
TTTGCATTGTGTTTCAAACCTCGTACATGCAGGTGAAGTT
ATAGGAAATGGCAATGTTGTGGTTCACCTTGTGTGTTGCA
GGAACTACATGAACGACAGCCTTCGCACTAATGTGTTTGT
GAGATTTCAAGCTGAGACCATCGCCTGTGCCTGCATTTAC
CTCGCTGCACGAGTGCTTCAGATATCGTTACCCTCTCGGC
CGATTTGGTACCTGCTGTTTGGTGCCACGGAGGAAGAGAT
CAAAGACATATGTACAACCACATTGAAGTTGTACACAAGA
AGAAAGCCAAATTACGATTTGCTGGAAAAGGAAGTGGACA
AGCGAAAGATGGCGATACAGGACGCCAAACTGAAGGCCAA
AGGACTGAATCCAGATGGCACCCCTGCTATCTGTTCATTT
GGTGGATTCTCTCCTGCATCCAAACCATCTTCACCTAATA
TAATGAAAACCGACGAGAAGTCTCCCAACCTTCAAACACT
CAAGGCAATGAAAAAAGAACCAGAAGATCGTCCTCAGGGG
TCTAAGAGCCCACACAATGGTCTCAGGAAGGACAGTAAAT
TGGGTCGCAACAGTAGAAGTGCTAGTCGTTCTCGCTCTCG
GACGAGATCCCGGACCAGATCACGTTCTCCCAGAAGACAT
TACAACAACAGACGCAGTCACTCAGGCACTTACAGCTCTC
GCTCGCGGAGCCGCTCTCACAGCCGCAGCCTGTCTCCACG
CCGGCACACCAACCACGGCCCTCCATCTCCGCTACTGCCA
CACTTAAAGTCAAAGCAGCGCTCGGACGACCTGCACCAGC
ACAGCAGACACAGCCACAAGAGGAAACGCTCTCGCAGCCG
CTCTCGATCCACCAGCAAACCTCGCGAGCGGGACAGAGAG
CGGGACCGAGAGCGCGAGCGGGACAGAAGCTCCTCAGATC
TGGCGAAGAAGCACAAACATGAGCGCAGCAGCGGCGGCGG
ACATCACCGCGACCGGCGGGAACGCTCACGGTCATATGAA
CGCTCTCATAAAAGCAAACACCACAGCAGCAGCCATTCGA
GCCACAGCCGCCACAGACGCTGAGTGTTTTCCTGTCACAT
CACGTCTGCCAGTGCGCTTGTATTCAGTTTAAGTGGTCGA
CGTTGACCTAGTCATCTGTTTTAATTAATTTGATTTTCTC
TTGTGTTATTTTGGAGTTTTAGTTTTAAACGTGGAAAGAA
TGCGAAGCTACATATTTACAGTGTAAAGATGGGTTCAATG
TTGAGGAAATATGAGAAATGCTTTGATTTATAAAAGCAAC
CTTTTTCAGACGGTGGGAAATCACTAGTTACATTAAAACA
ATTGGAGATTTTCAGGAACGATGGAGACTTTGCACAGGTT
CATGAATGAATAATTGAGAGGCTCTACTGGTGAAGAAAAT
TGGTTTGTCTGGAAATAGATCACATTTTTTTTACAGGGGA
TGCAGACTTTTTTTTCTTTTTTTTTCTTTTTTGGATCATG
GTGACTTTGTTACACTGGTTTTTAGTCTGCACGTCTTCAT
GTCTGATTTTTACTCAATAAAAAGTGACTTATTCCTACTG
TAAA

Related Transcripts

Transcripts related to ccnl1a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ccnl1a-202 (1) Ensembl	Ensembl	948 nt	Select Tool ZFIN BLAST
aberrant processed transcript	ccnl1a-205 (1) Ensembl	Ensembl	2,499 nt	Select Tool ZFIN BLAST
mRNA	ccnl1a-201 (1) Ensembl	Ensembl	2,106 nt	Select Tool ZFIN BLAST
ncRNA	ccnl1a-002 (1) Ensembl	Ensembl	3,832 nt	Select Tool ZFIN BLAST
ncRNA	ccnl1a-004	Ensembl	1,564 nt
ncRNA	ccnl1a-008 (1) Ensembl	Ensembl	496 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations