Transcript

ccnl1a-202

ID

ZDB-TSCRIPT-090929-3277

Name

ccnl1a-202 Nomenclature History

Previous Names

ccnl1a-003
si:ch211-203b8.5-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ccnl1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000126563 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000126563.4|gene_biotype:protein_coding|ENSDARG00000055124.7 transcript_biotype:nonsense_mediated_decay gene_symbol:ccnl1a cdna chromosome:GRCz11:18:41512159:41520460:1
TTCGGCAGGTACCGACGACAGCGATCATGGAGCCGTCGAT
TGTTAACATTGCCGGTCCCGCCGCAAACACGCCCGCTAAT
AACAGCGAGGGCATACTAATAGGGGATAAAGTATATTCTG
AAGTCTTCCTTACCATAGACAATTCACTGATTCCAGAGGA
AAAGCTTTCCCCGACCCCGTCTATGCAGGATGGCCTCGAC
CTGTACACCGAGACCGACCTGCGGATCCTGGGCTGCGAGC
TCATCCAGTCCGCCGGAATCCTGCTGCGCCTTCCGCAGGT
TGCCATGGCTACTGGACAGGTCCTTTTTCATCGCTTCTTC
TACTCGAAGTCTTTCGTGAAACACAGTTTTGAGATTGTTG
CCATGGCATGTGTCAACTTGGCTTCGAAGATAGAAGAAGC
CCCTCGACGAATTAGGGATGTCATCAATGTGTTTCATCAT
TTAAGGCAGCTCCGAGGCAAAAGCGACCAGCTACATTTAC
CAATGCCTGGGTGATGTGGAATGGTACGTAGAGATGAAGC
AGTCGGCATGGCAACAGTGAGCGAGGTGTCGCTTCCCCCC
CTCCCCCGGGAGAAGCCAGTGGTCTGAAAGCGGTCACTGG
GATATCGGGGATCGACAGGAGTCCAAGTCCATTGATACTT
GATCAGAACTACATAAACACCAAAAACCAGGTGATAAAAG
CGGAGCGGCGTATACTGAAGGAGCTGGGCTTCTGTGTTCA
CGTCAAACACCCACACAAGATTATCGTCATGTACCTGCAA
GTCCTTGAATGTGAGAAGAACCAAACATTGGTCCAGACAG
CCTGGAACTACATGAACGACAGCCTTCGCACTAATGTGTT
TGTGAGATTTCAAGCTGAGACCATCGCCTGTGCCTGCATT
TACCTCGCTGCACGAGTGCTTCAGATATCGTTACCCTCTC
GGCCGATTTGGTACCTGCTGTTTGGTGC

OTTDART00000016032 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000016032|OTTDARG00000013491|ZDB-GENE-050419-206 ccnl1a|OTTDARP00000034022 CH211-203B8.5-003 LG_ BX950182.13 Danio rerio protein_coding KNOWN, 948 bp
TTCGGCAGGTACCGACGACAGCGATCATGGAGCCGTCGAT
TGTTAACATTGCCGGTCCCGCCGCAAACACGCCCGCTAAT
AACAGCGAGGGCATACTAATAGGGGATAAAGTATATTCTG
AAGTCTTCCTTACCATAGACAATTCACTGATTCCAGAGGA
AAAGCTTTCCCCGACCCCGTCTATGCAGGATGGCCTCGAC
CTGTACACCGAGACCGACCTGCGGATCCTGGGCTGCGAGC
TCATCCAGTCCGCCGGAATCCTGCTGCGCCTTCCGCAGGT
TGCCATGGCTACTGGACAGGTCCTTTTTCATCGCTTCTTC
TACTCGAAGTCTTTCGTGAAACACAGTTTTGAGATTGTTG
CCATGGCATGTGTCAACTTGGCTTCGAAGATAGAAGAAGC
CCCTCGACGAATTAGGGATGTCATCAATGTGTTTCATCAT
TTAAGGCAGCTCCGAGGCAAAAGCGACCAGCTACATTTAC
CAATGCCTGGGTGATGTGGAATGGTACGTAGAGATGAAGC
AGTCGGCATGGCAACAGTGAGCGAGGTGTCGCTTCCCCCC
CTCCCCCGGGAGAAGCCAGTGGTCTGAAAGCGGTCACTGG
GATATCGGGGATCGACAGGAGTCCAAGTCCATTGATACTT
GATCAGAACTACATAAACACCAAAAACCAGGTGATAAAAG
CGGAGCGGCGTATACTGAAGGAGCTGGGCTTCTGTGTTCA
CGTCAAACACCCACACAAGATTATCGTCATGTACCTGCAA
GTCCTTGAATGTGAGAAGAACCAAACATTGGTCCAGACAG
CCTGGAACTACATGAACGACAGCCTTCGCACTAATGTGTT
TGTGAGATTTCAAGCTGAGACCATCGCCTGTGCCTGCATT
TACCTCGCTGCACGAGTGCTTCAGATATCGTTACCCTCTC
GGCCGATTTGGTACCTGCTGTTTGGTGC

Related Transcripts

Transcripts related to ccnl1a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ccnl1a-202	Ensembl	948 nt
aberrant processed transcript	ccnl1a-205 (1) Ensembl	Ensembl	2,499 nt	Select Tool ZFIN BLAST
mRNA	ccnl1a-201 (1) Ensembl	Ensembl	2,106 nt	Select Tool ZFIN BLAST
ncRNA	ccnl1a-002 (1) Ensembl	Ensembl	3,832 nt	Select Tool ZFIN BLAST
ncRNA	ccnl1a-004 (1) Ensembl	Ensembl	1,564 nt	Select Tool ZFIN BLAST
ncRNA	ccnl1a-008 (1) Ensembl	Ensembl	496 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations