Transcript

herpud1-201

ID
ZDB-TSCRIPT-090929-3086
Name
herpud1-201 Nomenclature History
Previous Names
  • herpud1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000129631 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000129631.3|gene_biotype:protein_coding|ENSDARG00000024314.12 transcript_biotype:nonsense_mediated_decay gene_symbol:herpud1 cdna chromosome:GRCz11:18:17600761:17608571:1
GTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCG
TTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTT
GATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATA
AAGAGACGATCTCGCTGGCAAGCTGCTTCTGGACAACCTG
CTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCA
AACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACC
TGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACA
CACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCC
AGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGA
TGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACT
AGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACC
ACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACA
GCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTAC
ATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTC
CAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGG
CCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAA
GGCCCCATCAATGACCTACCAGCCAATCAGAATGCCCCAG
GACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCT
CCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAG
GAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAG
CATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTA
TTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTG
GTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCA
GACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACC
CGAGGTCAATCAGAACCAGCAGAACCAAAATGAGGACCAA
CATCCAGAACCCGTGGCGCCACCTGCTGAAGTGGAGGATG
TTGGTGTTGTTGACCCCGCGATGACAGCAGTGCCTGTTCC
CCAAGTCAGAGCACCCATCCTATGGACTGCCTGGGTGTTT
TTTAAAGCCTTTTTTGCTTCTCTGATACCTGAGCCTCCAC
AGGGTATTGCAAACTGATCCAGAAGCAGTCAGACAGAAAT
GACAAAAACTGAACTATCAAGCTCTTAGGACAGGACATTA
TAAACAAAGGCTACAAATCCTAGAAGTGGTAGCACTTTCC
AGTTCTTTTGGCTGTGTGACCTATGGCTGCACATTCTAAA
CAAACAAGTGCTTGGACATGGAGTTGTAAATATCGCTGGA
CAGTTTTTGCACAGCACTTTAGATAACCGCAACGGCTGGA
ATCGATAGTGTCGGTTGCCTGACCTGATCCTCTTATGTAG
GCTTCTGTCACCAAGACTTCATTTTTTTGAAGTGCTCCTC
GATGAGTGTCCAAGGATTAAACTCATGGGATTATCTTATT
AAGGTTCTAGTATGATGGACGACGAAGGCCACATATTGAT
TTTGTTCTAAGCGCATGAAAAGATGGAAAGTGCTTGGGAA
AATGCATTTGTGGTACTTTGAAGCTAATGGCGTTTATGCA
AGTAAAGTATGCCTACATGTTCTCTTTTTTAATTGTGCTC
GACCTGTGAAATGAGTAATGTTAATATTTATGAGGGACGC
GTTCAAGTATTGTGAGTGGAATTTGCAATTCAATGAGGAG
AGTTTGTTGGTGACCTCGGGATGAGCAGAAGGTGAATGAA
CCACACTTTGAATATCGCATCTTCATGACATGATGGAACT
GCACTTTGGGACCTGCAAAAGAGGAGAACAAAATATAACT
AATAATATATATGAAAAATTCAAATGACTGATTTGTAATC
TGATATTTATCAACACTGTAGCATTGCTGTCATTTCAGAT
TATGTATAATCAAGCTTTGTTATTAACATCATGAAAGTAA
GCCTCTTTGTACCAGAAAATGAAAACAATAAACACAATTT
CCT

OTTDART00000015390 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000015390|OTTDARG00000012988|ZDB-GENE-050913-47 herpud1|OTTDARP00000044060 herpud1-002 LG_ BX470170.5 Danio rerio protein_coding KNOWN, 2043 bp
GTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCG
TTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTT
GATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATA
AAGAGACGATCTCGCTGGCAAGCTGCTTCTGGACAACCTG
CTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCA
AACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACC
TGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACA
CACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCC
AGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGA
TGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACT
AGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACC
ACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACA
GCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTAC
ATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTC
CAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGG
CCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAA
GGCCCCATCAATGACCTACCAGCCAATCAGAATGCCCCAG
GACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCT
CCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAG
GAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAG
CATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTA
TTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTG
GTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCA
GACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACC
CGAGGTCAATCAGAACCAGCAGAACCAAAATGAGGACCAA
CATCCAGAACCCGTGGCGCCACCTGCTGAAGTGGAGGATG
TTGGTGTTGTTGACCCCGCGATGACAGCAGTGCCTGTTCC
CCAAGTCAGAGCACCCATCCTATGGACTGCCTGGGTGTTT
TTTAAAGCCTTTTTTGCTTCTCTGATACCTGAGCCTCCAC
AGGGTATTGCAAACTGATCCAGAAGCAGTCAGACAGAAAT
GACAAAAACTGAACTATCAAGCTCTTAGGACAGGACATTA
TAAACAAAGGCTACAAATCCTAGAAGTGGTAGCACTTTCC
AGTTCTTTTGGCTGTGTGACCTATGGCTGCACATTCTAAA
CAAACAAGTGCTTGGACATGGAGTTGTAAATATCGCTGGA
CAGTTTTTGCACAGCACTTTAGATAACCGCAACGGCTGGA
ATCGATAGTGTCGGTTGCCTGACCTGATCCTCTTATGTAG
GCTTCTGTCACCAAGACTTCATTTTTTTGAAGTGCTCCTC
GATGAGTGTCCAAGGATTAAACTCATGGGATTATCTTATT
AAGGTTCTAGTATGATGGACGACGAAGGCCACATATTGAT
TTTGTTCTAAGCGCATGAAAAGATGGAAAGTGCTTGGGAA
AATGCATTTGTGGTACTTTGAAGCTAATGGCGTTTATGCA
AGTAAAGTATGCCTACATGTTCTCTTTTTTAATTGTGCTC
GACCTGTGAAATGAGTAATGTTAATATTTATGAGGGACGC
GTTCAAGTATTGTGAGTGGAATTTGCAATTCAATGAGGAG
AGTTTGTTGGTGACCTCGGGATGAGCAGAAGGTGAATGAA
CCACACTTTGAATATCGCATCTTCATGACATGATGGAACT
GCACTTTGGGACCTGCAAAAGAGGAGAACAAAATATAACT
AATAATATATATGAAAAATTCAAATGACTGATTTGTAATC
TGATATTTATCAACACTGTAGCATTGCTGTCATTTCAGAT
TATGTATAATCAAGCTTTGTTATTAACATCATGAAAGTAA
GCCTCTTTGTACCAGAAAATGAAAACAATAAACACAATTT
CCT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations