Transcript

tpm2-004

ID

ZDB-TSCRIPT-090929-22454

Name

tpm2-004 Nomenclature History

Previous Names

ZFLNCT09504 (1)

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

tpm2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000160813 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000160813.2|gene_biotype:protein_coding|ENSDARG00000104682.3 transcript_biotype:retained_intron cdna chromosome:GRCz11:10:6340468:6350276:1
AGCGTTAACTCGAGCTCGACGCCTGTTTGTTTCGCTCTTT
GTGTGAATAGATTATTGTCCTCTGCACATTTCCTGAAGAT
ACGAGAAATTCACGCTTTTAGGTGCAAATATTGGAAGAGG
AGACTGAACTGAGACGTATTTGCTGTGGTTGGTGTTTATT
GATGAACGCATGATTGTTCACGGGGACGCAGCGACATCTT
CACCGTCCGTCCCGTGTCGCGTTTGACATTTATTGATAGT
CGATTTTTGGGGATTCAGGAGGAATGGCATCGATAACCTC
CATAGAGGCCGTGAAGAGGAAGATCCAGACGCTGCAGCAG
CAGGCGGACGATGCGGAGGATCGGGCAGAAATGCTGCAGA
GAGAGGTGGACCTGGAGCGGCAGTGCAGAGAGAGAGCCGA
GGCTGAGGTGGCATCTCTGAACAGACGTATCCAGCTGGTT
GAGGAGGAGTTAGATCGCGCTCAAGAAAGACTCGCCACTG
CACTACAGAAGCTGGAGGAGGCAGAGAAAGCTGCAGATGA
GAGCGAGAGAGGAATGAAGGTGATAGAAAACAGAGCAACA
AAAGATGAGGAGAAGATGGAGATCCAGGAGATGCAGCTGA
AGGAGGCCAAACACATCGCTGAGGAGGCTGACCGCAAATA
TGAGGAGGTGGCACGCAAGCTGGTGATTCTTGAGGGCGAG
CTTGAGCGCTCTGAGGAACGAGCTGAAGTGGCTGAGGCGT
GAGTACACACAAATCATAATCGAACTGTTTAGTAAAGATT
GGGTTTCATTGCATTGTTCCATAAACACACCAGTAACCTT
TTACT

OTTDART00000042772 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000042772|OTTDARG00000027853|ZDB-GENE-040625-114 tpm2|no_translation tpm2-004 LG_ CT573295.9 Danio rerio protein_coding KNOWN, 805 bp
AGCGTTAACTCGAGCTCGACGCCTGTTTGTTTCGCTCTTT
GTGTGAATAGATTATTGTCCTCTGCACATTTCCTGAAGAT
ACGAGAAATTCACGCTTTTAGGTGCAAATATTGGAAGAGG
AGACTGAACTGAGACGTATTTGCTGTGGTTGGTGTTTATT
GATGAACGCATGATTGTTCACGGGGACGCAGCGACATCTT
CACCGTCCGTCCCGTGTCGCGTTTGACATTTATTGATAGT
CGATTTTTGGGGATTCAGGAGGAATGGCATCGATAACCTC
CATAGAGGCCGTGAAGAGGAAGATCCAGACGCTGCAGCAG
CAGGCGGACGATGCGGAGGATCGGGCAGAAATGCTGCAGA
GAGAGGTGGACCTGGAGCGGCAGTGCAGAGAGAGAGCCGA
GGCTGAGGTGGCATCTCTGAACAGACGTATCCAGCTGGTT
GAGGAGGAGTTAGATCGCGCTCAAGAAAGACTCGCCACTG
CACTACAGAAGCTGGAGGAGGCAGAGAAAGCTGCAGATGA
GAGCGAGAGAGGAATGAAGGTGATAGAAAACAGAGCAACA
AAAGATGAGGAGAAGATGGAGATCCAGGAGATGCAGCTGA
AGGAGGCCAAACACATCGCTGAGGAGGCTGACCGCAAATA
TGAGGAGGTGGCACGCAAGCTGGTGATTCTTGAGGGCGAG
CTTGAGCGCTCTGAGGAACGAGCTGAAGTGGCTGAGGCGT
GAGTACACACAAATCATAATCGAACTGTTTAGTAAAGATT
GGGTTTCATTGCATTGTTCCATAAACACACCAGTAACCTT
TTACT

Related Transcripts

Transcripts related to tpm2

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tpm2-201 (1) Ensembl	Ensembl	3,736 nt	Select Tool ZFIN BLAST
mRNA	tpm2-203 (1) Ensembl	Ensembl	863 nt	Select Tool ZFIN BLAST
mRNA	tpm2-204 (1) Ensembl	Ensembl	3,616 nt	Select Tool ZFIN BLAST
mRNA	tpm2-205 (1) Ensembl	Ensembl	691 nt	Select Tool ZFIN BLAST
mRNA	tpm2-206 (1) Ensembl	Ensembl	1,305 nt	Select Tool ZFIN BLAST
ncRNA	tpm2-004	Ensembl	805 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations