Transcript

srd5a2a-202

ID

ZDB-TSCRIPT-090929-21374

Name

srd5a2a-202 Nomenclature History

Previous Names

srd5a2a-003
zgc:112208-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

srd5a2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000123527 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000123527.4|gene_biotype:protein_coding|ENSDARG00000043587.7 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:1:51066782:51073107:1
ACACATCAAGACGGAGAAGACAGCAGGGCACTGAGAAACA
CGCACAGCAATGCTCTGTCAGGAAAACACTGTTCACTTTG
GCAGCTGGGCTTTTGTAGTCGGTGGATTGCTTTACCTTCT
GAAACAACTGACCACGCAAACGGCGTACGGACGCTATGTG
GACACAAAATCCCCTGGGTTGATGGTCCCAGCCAGGGCAG
GCTGGTTTATACAGGAACTTCCTTCATTCTTAGTGCCCGT
GCTGTTGTTTTTTGCAACGGAAAGTTTGCCAGGCGTTGGA
AAACACATACTGTTCTGGACATTTTGTTTGCACTACTTTC
AAAGGTTTGTTGGTGTTTTTGTGTGGAATGGCCATCAATA
TCCACAGTGACTATATTTTACGAAACCTGAGGAAACCCGG
AGAGGTCAGCTATAAAATCCCAAGAGGAGGGCTGTTTGAG
CTGGTGTCCGGCGCCAACTTCTTCGGGGAGATTGTTGAAT
GGTGTGGATACGCCGTGGCCAGCTGGTCATTTCCTGCTTT
CTCCTTCGCCCTGTTCACCATCTGCTCCATCGGGCCTCGA
GCCTACCATCATCACAGGTATTACTTGGAGAAATTTAAGG
ATTACCCCAAATCAAGAAAGGCTGTGATCCCTTTCCTGCT
ATAAGAAATCAAAAAAGGAAAAACATCCTAAAATAAGTGC
ACAGAGTCAGCCATCTACTCCAGTGATGTTTAAACTCTCC
TAGTCACATTTACCACCAAGAGACATTTCTACATTTCTTG
TATTTATTTTTTTTAAATACATGTTTACATCTGTACAAAG
TGATCTACACACACTCGTCTTGTCAGAAAAACAAATGATC
AGTAATAAATGATTACAAC

OTTDART00000041318 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000041318|OTTDARG00000029979|ZDB-GENE-050417-199 srd5a2a|OTTDARP00000033004 srd5a2a-003 LG_ CU651563.7 Danio rerio protein_coding KNOWN, 859 bp
ACACATCAAGACGGAGAAGACAGCAGGGCACTGAGAAACA
CGCACAGCAATGCTCTGTCAGGAAAACACTGTTCACTTTG
GCAGCTGGGCTTTTGTAGTCGGTGGATTGCTTTACCTTCT
GAAACAACTGACCACGCAAACGGCGTACGGACGCTATGTG
GACACAAAATCCCCTGGGTTGATGGTCCCAGCCAGGGCAG
GCTGGTTTATACAGGAACTTCCTTCATTCTTAGTGCCCGT
GCTGTTGTTTTTTGCAACGGAAAGTTTGCCAGGCGTTGGA
AAACACATACTGTTCTGGACATTTTGTTTGCACTACTTTC
AAAGGTTTGTTGGTGTTTTTGTGTGGAATGGCCATCAATA
TCCACAGTGACTATATTTTACGAAACCTGAGGAAACCCGG
AGAGGTCAGCTATAAAATCCCAAGAGGAGGGCTGTTTGAG
CTGGTGTCCGGCGCCAACTTCTTCGGGGAGATTGTTGAAT
GGTGTGGATACGCCGTGGCCAGCTGGTCATTTCCTGCTTT
CTCCTTCGCCCTGTTCACCATCTGCTCCATCGGGCCTCGA
GCCTACCATCATCACAGGTATTACTTGGAGAAATTTAAGG
ATTACCCCAAATCAAGAAAGGCTGTGATCCCTTTCCTGCT
ATAAGAAATCAAAAAAGGAAAAACATCCTAAAATAAGTGC
ACAGAGTCAGCCATCTACTCCAGTGATGTTTAAACTCTCC
TAGTCACATTTACCACCAAGAGACATTTCTACATTTCTTG
TATTTATTTTTTTTAAATACATGTTTACATCTGTACAAAG
TGATCTACACACACTCGTCTTGTCAGAAAAACAAATGATC
AGTAATAAATGATTACAAC

Related Transcripts

Transcripts related to srd5a2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srd5a2a-202	Ensembl	859 nt
mRNA	srd5a2a-201 (1) Ensembl	Ensembl	1,155 nt	Select Tool ZFIN BLAST
ncRNA	srd5a2a-002 (1) Ensembl	Ensembl	1,630 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations