Transcript

hdac3-202

ID

ZDB-TSCRIPT-090929-18106

Name

hdac3-202 Nomenclature History

Previous Names

hdac3-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

hdac3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000145250 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000145250.3|gene_biotype:protein_coding|ENSDARG00000037514.7 transcript_biotype:nonsense_mediated_decay gene_symbol:hdac3 cdna chromosome:GRCz11:14:12189837:12203193:1
AGGCATCTGGATTTTGTTACGTGAACGACATTGTCATCAG
TATTCTTGAACTCCTGAAGTATCATCCACGTGTGCTCTAC
ATTGACATTGATATTCATCATGGGGATGGTGTACAGGAAG
CATTTTATCTCACAGACAGGGTCATGACTGTGTCCTTCCA
CAAATATGGGAACTATTTTTTCCCAGGAACTGACAACTTT
TTCAGCCAGTTATCAAGCAGGTGGTAGACTTTTATCAGCC
AACCTGTATTGTTCTTCAGTGTGGAGCAGATTCTTTGGGA
TGTGATCGATTAGGATGCTTTAATCTCAGCATACGAGGAC
ATGGAGAATGTGTGGAGTTTGTGAAGGGCTTCAAAATTCC
GCTGCTTGTTCTGGGTGGAGGAGGGTACACCGTGAGGAAT
GTGGCTAGATGTTGGACATTTGAAACATCATTGCTTGTTG
AGGAGTCAATTAGTGATGAACTTCCATATAGTGAATACTT
TGAATATTTTGCTCCAGACTTCACACTTCATCCAGATGTC
AGCACAAGGATAGAAAACCAAAATTCTAGACAATATTTGG
AACAAATTCGTCAAACTGTGTTTGAAAATTTGAAGATGTT
GAATCATGCACCAAGTGTCCAGATCCACGACGTTCCCTCT
GATTTGCTGAGCTACGAGCGACCAGACGAGGCTGATCCTG
AAGAGAGAGGATCAGAAGAGAACTT

OTTDART00000037706 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000037706|OTTDARG00000027868|ZDB-GENE-040426-847 hdac3|OTTDARP00000046830 hdac3-002 LG_ BX927254.15 Danio rerio protein_coding KNOWN, 705 bp
AGGCATCTGGATTTTGTTACGTGAACGACATTGTCATCAG
TATTCTTGAACTCCTGAAGTATCATCCACGTGTGCTCTAC
ATTGACATTGATATTCATCATGGGGATGGTGTACAGGAAG
CATTTTATCTCACAGACAGGGTCATGACTGTGTCCTTCCA
CAAATATGGGAACTATTTTTTCCCAGGAACTGACAACTTT
TTCAGCCAGTTATCAAGCAGGTGGTAGACTTTTATCAGCC
AACCTGTATTGTTCTTCAGTGTGGAGCAGATTCTTTGGGA
TGTGATCGATTAGGATGCTTTAATCTCAGCATACGAGGAC
ATGGAGAATGTGTGGAGTTTGTGAAGGGCTTCAAAATTCC
GCTGCTTGTTCTGGGTGGAGGAGGGTACACCGTGAGGAAT
GTGGCTAGATGTTGGACATTTGAAACATCATTGCTTGTTG
AGGAGTCAATTAGTGATGAACTTCCATATAGTGAATACTT
TGAATATTTTGCTCCAGACTTCACACTTCATCCAGATGTC
AGCACAAGGATAGAAAACCAAAATTCTAGACAATATTTGG
AACAAATTCGTCAAACTGTGTTTGAAAATTTGAAGATGTT
GAATCATGCACCAAGTGTCCAGATCCACGACGTTCCCTCT
GATTTGCTGAGCTACGAGCGACCAGACGAGGCTGATCCTG
AAGAGAGAGGATCAGAAGAGAACTT

Related Transcripts

Transcripts related to hdac3

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	hdac3-202	Ensembl	705 nt
mRNA	hdac3-201 (1) Ensembl	Ensembl	2,138 nt	Select Tool ZFIN BLAST
mRNA	ottdart00000032801 (1)	Havana	2,135 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations