Transcript

kdm5c-002

ID
ZDB-TSCRIPT-090929-14096
Name
kdm5c-002 Nomenclature History
Previous Names
  • si:ch211-218o21.2-002
Transcript Type
ncRNA
Annotation Status
retained intron
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000127053 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000127053.3|gene_biotype:protein_coding|ENSDARG00000006124.12 transcript_biotype:protein_coding gene_symbol:kdm5c cdna chromosome:GRCz11:8:36983559:37026607:1
GTGATGAAACCAAGATGGCGTGTAGTTCAGACAGGATGAA
CGGTGGATAGGTGACGGGGAAGGAAACACTGGAAAACAAC
GCGTATTTTGTGCTCGCGCACGAAAACGGTTATTATAAAG
AAAACGTCAACTTACACGGGACGTTCAGGAGTCTGTAAAA
AGAAGATCTCCGCGAACATCATCCCTCTAAGCGACCGAGA
GAGTGTGTATGTGAGTGAGTGAGTGAGTAAATGTGTGTGT
GCGCGCTGGGATGGGCTGATCGAGGAGGCCGCAGAGCCAC
TGCCACCCAGAGACTGACCCTCTACCGAACAATAGACCCC
GTGATCATCATCATACAAGATCCAGAAAGACACAAATAAT
AAAAAACACCGGCTCAGGTGTCACCGAAGAATAAGAAGAA
CTCACATCAAGTGAAAAAAATAATGATGGATGTAGGGGAG
GAGTTTGTTCCACCACCTGAATGTCCAGTATTTGAACCAT
CATGGGAGGAGTTTGCAGATCCATTGGGATATATTGCCAA
AATCCGTCCAATAGCAGAAAAGTCTGGAATATGCAAGATT
CGTCCACCACCCGACTGGCAGCCACCGTTTGCTGTGGAGG
TGGACAATTTTCATTTCACACCCCGTATTCAGAGGCTCAA
TGAGCTAGAGGCTGAGACACGAGTAAAGCTGAATTACCTA
GACAGAATTGCCAAGTTCTGGGAGATCCAGGGATCCTCTC
TGAAGATCCCCAATTTAGAGCGACGTATTCTGGATCTGTT
CAGCTTGGCCAAGATTGTCACAGAGGAAGGGGGCTTTGAG
TCTGTGAGTAAGGAAAGGCGGTGGGCTCGTGTGGCACAGA
AACTCGGTTATCCTCCTGGTAAAAACATTGGCTCTCTCCT
GAGGTCCCACTATGAGAGGATTGTGTATCCATTTGAGTTG
TTCCAGTCTGGAGCCAGTTTACCGCCACGTAAACCCAGGC
AATATGACAGTGATGAGGTAGACCGAGAATACAAACCCCA
CTCCATTCCTTTGCGTCAGTCAGTGCCACCATCCAAGATG
AGCAGCTATGGACGAAGGGCCAATCGCCTTCAGCCTGAGG
GTCCCGAGGATCCAACTCACCACCCTCTTACAACTGGCTC
TCAACACATCTCCTCGCCGGAGCCTACAGAAGAAGACATT
GAGAAGAACCCTGAGCTGAAAAAGCTACAGATCTATGGGG
CTGGACCTAAAATGATGGGCCTTGGTCTTGTACCTCGAGA
CAAGACGCGGAAGAAAGATGATCTGCCGCAGACTGTAATT
GTGCGGGACAGTGCTGTGAAGGATGAGCCTGCAGAGACGG
CGGTTACAAAATCAGATCCAGACATTCCACCGCCACCCCC
AAATCTCATCATCAAGGAGGATGTCGATGATGACAAAAGT
CATATTGACAAACCTAACGATCCCAGTGATGAGCCTTGCA
CTAAGATGACCATGAGACTCCGACGCAACCTCAATAATCC
ACAGTTTGTGGACTCGTTTGTGTGTCGAATGTGTGGACGC
GGGGATGAGGACGAGAAGTTGATGCTCTGTGATGGGTGTG
ATGATAATTACCACACATTCTGCCTGATACCTCCACTCAC
AGACCCACCCAAGGGCAACTGGCGCTGTCCCAAATGCGTA
GCAGAGGAGTGTAAAAAGCCATCAGAGGCATTCGGCTTCG
AACAGGCCACAAGAGAGTACACGTTACAGAGCTTCGGTGA
AATGGCCGACACTTTCAAAGCAGACTACTTCAACATGCCT
GTCCATATGGTTCCCACAGAGCTGGTTGAAAAGGAGTTTT
GGAGGTTGGTTAGCAGTATTGAAGAAGATGTAACTGTAGA
ATATGGTGCCGATATTCACTCAAAAGAATTTGGTAGTGGT
TTTCCTGTCAACAACGGCAAGAGACAATTATCAGAGGAGG
AAGAGGAATATGCCCGCAGCGGCTGGAACCTAAATGTTAT
GCCAGTGTTGGAACAGTCATTGTTGTGCCACATCAATGCA
GATATCTCTGGCATGAAGGTGCCATGGCTATATGTGGGCA
TGGTGTTCTCTGCTTTCTGTTGGCACATAGAGGACCACTG
GAGTTACTCCATCAATTATTTACACTGGGGCGAGCCCAAA
ACATGGTATGGAGTTCCATGTTCAGCTGCAGAGAAGTTGG
AGGAGGTGATGAAGAAACTCACACCTGAGCTATTTGAGTT
CCAGCCAGACCTGCTCCACCAGCTAGTCACCATCATGAAC
CCAAATATACTCATGAGTCATGGAGTGCCGGTGGTTCGGA
CCAATCAGTGTGCTGGGGAGTTTGTCATCACCTTTCCACG
AGCTTACCACAGCGGTTTTAATCAGGGATATAACTTTGCC
GAAGCTGTCAACTTCTGCACTGCAGATTGGTTGCCCACAG
GGCGCTCTTGTATTGAGCATTACCGGCAGCTGAGGCGCTA
CTGTGTGTTCTCTCAAGAGGAACTCACCTGCAAGATGGCG
GCCTGCCCAGAAAAGCTGGATCTGAACCTGGCAGCCGCCA
CACACAGGGAGATGTTCATCATAGTGCAGGAAGAGAGGAA
ACTACGCAAAAGCCTACTGGAAAGGGGCATCAAGGAAGCT
GAAAGGGAGGCCTTTGAGTTGCTGCCTGATGATGAACGAC
AGTGTGACAAATGTAAGACCACCTGCTTCCTCTCAGCTCT
GGCATGTTCGAACTGCCCAGAGCGTCTCGTCTGCCTCTAT
CATGCCCAGGACCTCTGCTCTTGCCCGAGTGAAAAACTCT
ACCTCAGGTATCGCTATACTCTGGATGAACTGTTGGCCAT
GTTGCATCGGTTGAAAGTTCGCGCTGAGTCTTTTGACTCT
TGGGCTAACCGCGTGAAGGAAGCCCTAGAGCAGGATGAAG
GCAACAAAATAGATATTAAAGATCTGGAGGTATTAAAAGA
AGAGGCAGCTGACAAGAAGTTCCCCAATAATGAGCTGCTC
CAGCGCCTCAACACTGTCTTCGTGGACATAGAGAAGTGCG
AGAGCTGCAGCACAGAACTCCTCAGCAACAGCCAGAGCAG
TAGAATGACCCTGAAGGAGCTGAAGACTCTGGTGGACACC
ATGCAGAACCTGCCATGTGTTATAAAGCAGCAGGACGAAG
TTCAGCTGATATTGCAGAAGATAGAGGAGTTTGATTCCCG
TGCTCAAGTTCTGGTCGACAGCACCAAGAGTGAATGGAAG
CAGGACTCTCCTCTTCCTGTGGCCACTGAGATCCAGGCTC
TGCTAGAGGAAGGTGCATCACTACCGGTTATTGCCCCAGC
TTGTGAGCTTTTGAGTGGGCTGTTGGAGCAGGGGCGCTGG
CTGGGAGAGGTCAGGCGGACGTTAGGGCCAGAGGGCAGTG
AGGTGACTCTGACTGTGCTAAGGAACTTGATGGAGTCGGG
CTGTAATGTACCACAGAGTGTGTCAGTGGAGACTGCAATG
GCTGAACTGCAAGAGCTCTTGACAATAGCTGAACGCTGGG
AGGAGAAGGCGCAGATATGCTTGGAGGACAGGCAGAAACA
CCATTTATCAACGCTGGAGGCTATTGTGAATGAGGCTCAA
CTAATACCAGTCCAGCTGCCTAATATCCTGTCCCTACAGG
CCTGCTTGAGCCGAGCTCGGGCTTGGGTCACAGATCTGGA
GGAAATTCAGAATGGTGAGCACTATCCATGTTTGGATGAC
CTGGAGGGTCTGGTAGCCATTGGGAGGGACTTGCCAGTGA
AGATGGAGGAGCTGAAGCAGCTGGAGCTGCAGGTGGCCAG
TGCTCACTCCTGGAGAGAGAAGGCCAGCAAAACCTTTCTG
AAGAAGAACAGCCAACATAGTCTGCTCGAGGTGCTGTGCC
CATGTGTTGAGAAGAGCAAGAAGATGGAGGACAACTCAAT
GGTTACAGAAGCAGATTCGGATGTCAATGTATTAGGCCTC
ACAGCTCAGGACCTCAGAGACCCAGGAGCTATTGTAATGG
CATTTAAAGAAGGGGAGCGTCTGGAGAAAGAAGCCCTCCT
CCGCCTCCAGCAGGTTAATTTGGCGAAACCCAGTATCGAA
AATGGAGTAAGCACTGACCAGGACAGTATCAAGACAGAAA
AGAAACAGAGTAACTCCATGGAGACAGATGTGCCCCTTAA
CTCAGACAGTCCCGTGCTGCAAAATGGAGGCTCTTCCCAT
TCCCTCACCTCTAGCCAAACTGTGTGTATTTGTGGTGGCC
CACCTCGCCCCTTGCTTCACCGGTGCCATCTGTGCAAAGA
CTGGTTCCATGGAGGTTGTGTGTCCTTCCCACCATTGTTG
GCCACTTCAGACACGCATCTTACAAAACCCCTCTGCTGGT
GGGACTGGAACACGCGTTTTCTCTGTCCGCGGTGCCAGCG
ATCCCGACGGCCACGGCTGGAAACTATTCTAGCGCTGCTG
GTGGCGCTGCAGAGGTTACCTGTACGGCTGCCAGAGGGAG
AAGCGTTACAGTGTCTTACAGAGAGAGCTATTAACTGGCA
AGGTCGAGCCAAACAGGCATTAGACACTCCAGAAGTACAG
GAGGCGCTAGACAGACTGCAACAAGTAGAGGATGAAATGG
TCAGTATAAAAGAGGAAGAACCAGAGGAGAAAAAGAAATG
GAATGGAGATGCTGTAATTGTGCTTTCTGACTCGGAGGAA
GCAGAAGATGGTGTTATCGATCTGACGGAAGATGGGAACT
CGCCAAAAAAGAATGAAAGGAACGCTGTCAATGGTACACA
GTCTGGCTGTGAAAATGGAATTGGCAGGAAGTCGAGTGCA
CATGAAGTTACAGGGGTGGAGTCTCTGTTGTCACTAGTGC
CGAGTCTTAAAGGGCCAGTGGTGGAGCTGAACACATCTGT
CAGAGCACAGCTGGAGGAGCTTCAGCTTGAAGGAGACCTG
CTGGAGGTCACGCTTGACCAGACACACGCCATCTACCGCA
TCCTTCAGGCATCATCTCAGCCGCCCCAGGACACCTTGCG
GACACTCATACAGATTGAACTGCAGGAGCAGAGAAGCTCA
GGTCGTGGCAACAAGTCGAAAGACTCCAAGAGGAAGAGAA
AGAGCCAGAAAACCGAAGGCGAGCCGAAATCCACAGAGGC
TTCAGACTGCAAGAAGACGAAAGCCCTCAATCTCAGCCCA
CCTACAGACACACACACAGATGTTGTGATGTTTTCCTGAA
GCTGTGGAGGAGCCGATGGAGAACCATGAACCACAGAGAC
AGAAAAGCGCAGGGCTCAGGCTCATTCCCCCACATAATAA
GCTCACGTTAATGTTTCTTTTCAACCCATGAAATGGATGA
TCCTGATCATACTAACCACTGCACTTTTTCTGTTTGTTTG
TTTTCTCCTCCGTTTGTGTCTGTTCACTCCCCTCATCCTG
AACAGTGCACTGGTGCAGGCGGGTAATCCTGTTTCTCTTA
GAGGAGGGATAAAAGGGGATTCGCCCTGCGGTTAAGCTGT
CTGTCTTTACAGTATAGATGTACCAAACTGTTCTTAACGC
CAATGCCGTGTGCTGCATAAAAATGACTTGTCCAGGTATA
CACACGTTCACACACACATACTCGGCGGGGCAGAAGGGGA
GACTGGCATTGGCTGCCACGATGACACCGTATTCTTTTTG
TACAGAGTCTCACGTTTTTGTCTGGGAGGCTCGACGTTGT
GAATAAACTAGTACAATATTTTGAAAGTGTGACAGAAAAA
AACAAAGGCATTTACGTTCTGGTGCTACTTTCCTAAGATA
GGTTCCTGCATAGTCCTTTTCCACTTCTTCATTGTCATTT
CCTTTCAGTGCTTCTGTTGTGTCTCTTAAGCTTCCTGCTC
TCCTCTTCCTCTCCACACAGCTGTACAAACTCTCACTTTA
ACTCCCTTTATGTCCATCTTCTTTTGTCGCTGGGGTTCTA
ATATTATTCTATTATTATTATTATTATTATTGGTATTGCT
ATTGCAGACACACGCGGTCGTGAGTTTGTGTATAAACATT
TTCATTTCCATGTTGCCTTTGTTTCTTTTCACTCTTGTTA
GAAAATAAAAGTTTAGAATTGTTTTAGGAA

OTTDART00000032783 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000032783|OTTDARG00000024977|ZDB-GENE-060810-94 kdm5c|no_translation CH211-218O21.2-002 LG_ BX537348.8 Danio rerio protein_coding NOVEL, 783 bp
GCTGAGACACGAGTAAAGCTGAATTACCTAGACAGAATTG
CCAAGTTCTGGGAGATCCAGGGATCCTCTCTGAAGATCCC
CAATTTAGAGCGACGTATTCTGGATCTGTTCAGCTTGGCC
AAGATTGTCACAGAGGAAGGGGGCTTTGAGTCTGTGAGTA
AGGAAAGGCGGTGGGCTCGTGTGGCACAGAAACTCGGTTA
TCCTCCTGGTAAAAACATTGGCTCTCTCCTGAGGTCCCAC
TATGAGAGGATTGTGTATCCATTTGAGTTGTTCCAGTCTG
GAGCCAGTTTACCGCCACGTAAACCCAGGCAATATGACAG
TGATGAGGTAGACCGAGAATACAAACCCCACTCCATTCCT
TTGCGTCAGTCAGTGCCACCATCCAAGATGAGCAGCTATG
GACGAAGGGCCAATCGCCTTCAGCCTGAGGTGAGTGATAT
TACCACTGTTTTTTAAATGTTTTGTTAAACTGAAAAAAAA
ATAGTGATGACAAAGTGTTGTGTATTATTTACAAATGTAG
GTTATGTGTAAAAATCAATGTTTACATGTTATATGTCCTA
AAATGCCACTAAACTGGTCCAAAATCTACTAGTCCAAGCC
TGATTTTGAGTAAATGTAATAGATGCATACTGATAGTTTT
AACCCTAGCTTTAAATTGCTGTAGAGCTGGCCAGTGTTAA
AGGATTCATCCAAGTATTTGCTTTGTTTTAGCGCTTTTGG
ATTAGCATTGACCATGCTCTCAAGGCATTTCCTAGCATGC
TTCGCTCCCTGTGCAGTTAAAAG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations