Transcript

rnf220a-205

ID

ZDB-TSCRIPT-090929-14035

Name

rnf220a-205 Nomenclature History

Previous Names

rnf220a-002
zgc:153254-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

rnf220a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000143879 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000143879.3|gene_biotype:protein_coding|ENSDARG00000060929.8 transcript_biotype:nonsense_mediated_decay gene_symbol:rnf220a cdna chromosome:GRCz11:2:33189584:33200368:1
ATGACCGGTAGAAGTATGGCGGCGGTGGCGCGCTGAACCG
AACTACTCCAGTGAGCATAACATTTTCAATCCTTATTCAT
CCTTCATAAATTGATTATTTAGTCCCATAACGGCGTTTTG
GAGGAGAGTTATCCGGGCGTTATGCTTTAGTAAACCAAAT
GAGTTCTGGGAGTTGTGGCGTTTGCAATGGAAGAGGAGTT
GCAGAGCAATGGGAAGAGAGAAACGTTTTTACGAGTGCGA
GCTAACAGGCAAACACGATTGAATGCCCGGATTGGGAAAA
TGAAGCGCCGGAAGCCTGAGGATGGACAGGTATGTCCACT
GTGCAGCGCCCCGCTGGCAGGGACAGAGGAGGAAATGAGT
AGGCATGTGGAACAATGTCTGTTCAAGGTAGCTTCATGAA
CCCAGAGATCTGGGAATCCAACCTCCTCTAGAAAGTTTGG
CCTTTCTGCCCTCACCTTTCCCTGGACATCAGCATCTGAC
AGACATCAGCATCTGACAAAGCATACACACATACATACAA
GGGAAGGTGCAACAGAGGAGGATTCTGCAGATGTTGAAGG
AGAGAACGGAACGCGGTTTGAAGAGTACGAGTGGTGCGGA
CAAAAGAGGGTCCGAGCTACTACATTACTGGAAGGTGGTT
TCAGAGGAACAGGCTTTGCCATGTGTAGCACGAAGGAGAG
CCATGACAGTGACGCAGACCTGGACGTGGATGGAGATGAC
ACACTGGAGTACGGCAAAGCCCAGTACACTGAAGCAGACA
TCATTCCTTGCTCTGGAGAGGACCAGGGAGAGGCCAAAGA
ACGTGAGGCACTTCGTGGAGCCGTTTTGAATGGTGGCGTG
CCGTCCAATAGAATA

OTTDART00000032705 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000032705|OTTDARG00000024932|ZDB-GENE-060929-1006 rnf220a|OTTDARP00000026464 CH211-236L6.1-002 LG_none BX294160.6,BX324218.7 Danio rerio protein_coding KNOWN, 855 bp
ATGACCGGTAGAAGTATGGCGGCGGTGGCGCGCTGAACCG
AACTACTCCAGTGAGCATAACATTTTCAATCCTTATTCAT
CCTTCATAAATTGATTATTTAGTCCCATAACGGCGTTTTG
GAGGAGAGTTATCCGGGCGTTATGCTTTAGTAAACCAAAT
GAGTTCTGGGAGTTGTGGCGTTTGCAATGGAAGAGGAGTT
GCAGAGCAATGGGAAGAGAGAAACGTTTTTACGAGTGCGA
GCTAACAGGCAAACACGATTGAATGCCCGGATTGGGAAAA
TGAAGCGCCGGAAGCCTGAGGATGGACAGGTATGTCCACT
GTGCAGCGCCCCGCTGGCAGGGACAGAGGAGGAAATGAGT
AGGCATGTGGAACAATGTCTGTTCAAGGTAGCTTCATGAA
CCCAGAGATCTGGGAATCCAACCTCCTCTAGAAAGTTTGG
CCTTTCTGCCCTCACCTTTCCCTGGACATCAGCATCTGAC
AGACATCAGCATCTGACAAAGCATACACACATACATACAA
GGGAAGGTGCAACAGAGGAGGATTCTGCAGATGTTGAAGG
AGAGAACGGAACGCGGTTTGAAGAGTACGAGTGGTGCGGA
CAAAAGAGGGTCCGAGCTACTACATTACTGGAAGGTGGTT
TCAGAGGAACAGGCTTTGCCATGTGTAGCACGAAGGAGAG
CCATGACAGTGACGCAGACCTGGACGTGGATGGAGATGAC
ACACTGGAGTACGGCAAAGCCCAGTACACTGAAGCAGACA
TCATTCCTTGCTCTGGAGAGGACCAGGGAGAGGCCAAAGA
ACGTGAGGCACTTCGTGGAGCCGTTTTGAATGGTGGCGTG
CCGTCCAATAGAATA

Related Transcripts

Transcripts related to rnf220a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	rnf220a-205	Ensembl	855 nt
mRNA	rnf220a-201 (1) Ensembl	Ensembl	1,614 nt	Select Tool
mRNA	rnf220a-202 (1) Ensembl	Ensembl	1,734 nt	Select Tool
mRNA	rnf220a-203 (1) Ensembl	Ensembl	762 nt	Select Tool
mRNA	rnf220a-204 (1) Ensembl	Ensembl	694 nt	Select Tool
mRNA	rnf220a-206 (1) Ensembl	Ensembl	604 nt	Select Tool
mRNA	rnf220a-207 (1) Ensembl	Ensembl	1,339 nt	Select Tool ZFIN BLAST
mRNA	rnf220a-208 (1) Ensembl	Ensembl	2,707 nt	Select Tool ZFIN BLAST
mRNA	rnf220a-209 (1) Ensembl	Ensembl	5,466 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations