Transcript

caprin1b-004

ID

ZDB-TSCRIPT-090929-13362

Name

caprin1b-004 Nomenclature History

Previous Names

caprin1-004
dkey-10o6.4-004
ottdart00000031722
si:dkey-10o6.4-004

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

caprin1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000145383 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000145383.2|gene_biotype:protein_coding|ENSDARG00000054272.6 transcript_biotype:retained_intron gene_symbol:caprin1b cdna chromosome:GRCz11:18:38256189:38258669:-1
AGCACAACCTATGAAGCCAGTCAGTATGGAGATGCCACCA
ATGGTGTGTCAACCAGGTATGTTTCTATTTGCACCACATG
GCCCTGCAATTTGCATATTAGGTTGTTGTGTTTGTGCTTG
TTTCTAATCAACCGAAGCTTGTTGGCCTTTTGATTTCTAA
ACTTGCAGCTCACCCGGAGACTCATCTAGCACAGCCTCCA
GCTGTTGGCGTTCAGCCAGAACCCACGCAAATACCTATGG
TTTCTCCTTCACCAGAAACCTTCTCCACACCGCCACCGAT
GTATCAGTCCCCTCACACAGCTGATCCCAGACCACAGACA
GGCTCGATTGACCCAATTCAGGCCTCCATGCCCTTGACAG
AACAAACTCCTTCATCTGCAACGCTTCCTCCTGCCTCCCA
AACCCAGGTGATCCCAAAACCCTTGCACAGCAGCGGCATC
AATGTCAACGCAGCCCCATTCCAGTCCATGCAAACGGTAA
CAAACCTGAAAGCTGTTTTTAAAAAAAATGAAACCTGTCA
AATCAGGATCGCTCCTTAATGTTGTGATTAATCTAATATT
GCTACAGATTTGCAGAAAAGTCTCATCGGCTGCTAAAACT
ATAAAATATTAATTACAGGGGATTTTGCTGAGGATCAAGT
GGTATAGAGAACTACGAAACTTTACAAAGAGATCTATAAG
ATATAATTGAATTATAGAGGGTTTGCATATCCATTTCATT
CTGTAACTCTTTATCATCTTGTATTAAATGTTAACTTTTA
TCCTCAATCTGTTTTTCCTGAAAGGTGTTCAATCTGAATG
CTCCTGTCCCACCAGCTAATGATACAGACTCCATAAAGCA
GGCCAGCCAATATCAGAATAGCTACAGTCAGGGCTTTAAT
AGCCAGACACAGCTTCCTGTGG

OTTDART00000031722 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000031722|OTTDARG00000023447|ZDB-GENE-040426-2020 caprin1b|no_translation caprin1b-004 LG_ CT025900.11 Danio rerio protein_coding KNOWN, 902 bp
AGCACAACCTATGAAGCCAGTCAGTATGGAGATGCCACCA
ATGGTGTGTCAACCAGGTATGTTTCTATTTGCACCACATG
GCCCTGCAATTTGCATATTAGGTTGTTGTGTTTGTGCTTG
TTTCTAATCAACCGAAGCTTGTTGGCCTTTTGATTTCTAA
ACTTGCAGCTCACCCGGAGACTCATCTAGCACAGCCTCCA
GCTGTTGGCGTTCAGCCAGAACCCACGCAAATACCTATGG
TTTCTCCTTCACCAGAAACCTTCTCCACACCGCCACCGAT
GTATCAGTCCCCTCACACAGCTGATCCCAGACCACAGACA
GGCTCGATTGACCCAATTCAGGCCTCCATGCCCTTGACAG
AACAAACTCCTTCATCTGCAACGCTTCCTCCTGCCTCCCA
AACCCAGGTGATCCCAAAACCCTTGCACAGCAGCGGCATC
AATGTCAACGCAGCCCCATTCCAGTCCATGCAAACGGTAA
CAAACCTGAAAGCTGTTTTTAAAAAAAATGAAACCTGTCA
AATCAGGATCGCTCCTTAATGTTGTGATTAATCTAATATT
GCTACAGATTTGCAGAAAAGTCTCATCGGCTGCTAAAACT
ATAAAATATTAATTACAGGGGATTTTGCTGAGGATCAAGT
GGTATAGAGAACTACGAAACTTTACAAAGAGATCTATAAG
ATATAATTGAATTATAGAGGGTTTGCATATCCATTTCATT
CTGTAACTCTTTATCATCTTGTATTAAATGTTAACTTTTA
TCCTCAATCTGTTTTTCCTGAAAGGTGTTCAATCTGAATG
CTCCTGTCCCACCAGCTAATGATACAGACTCCATAAAGCA
GGCCAGCCAATATCAGAATAGCTACAGTCAGGGCTTTAAT
AGCCAGACACAGCTTCCTGTGG

Related Transcripts

Transcripts related to caprin1b

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	caprin1b-201 (1) Ensembl	Ensembl	2,654 nt	Select Tool
mRNA	caprin1b-202 (1) Ensembl	Ensembl	615 nt	Select Tool
mRNA	caprin1b-203 (1) Ensembl	Ensembl	595 nt	Select Tool
mRNA	caprin1b-205 (1) Ensembl	Ensembl	3,373 nt	Select Tool ZFIN BLAST
ncRNA	caprin1b-004	Ensembl	902 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations