Transcript

nr1d2b-202

ID

ZDB-TSCRIPT-090929-12673

Name

nr1d2b-202 Nomenclature History

Previous Names

nr1d2b-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

nr1d2b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000124597 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000124597.4|gene_biotype:protein_coding|ENSDARG00000009594.11 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:19:17400263:17403895:1
GCAGCCGACGCTCAGTTTCGCTCTATTCGCCCTACGTGCG
CCCACACAGTGTTAAACCGAGGCTCGTTTTATTCAGAAAA
CCGATCTACAGCAAGCTGAGTTTTTGACAGACTTGTAACC
GTGTCGTTTTAGGCTCTAATGCTTTTAAATTACGTTTCGG
ACTTCGGATGTCTACTTTTCCAAAACAAAACAATTACAGA
CTTTTTTCCCATGTTTCTAAGAGGATAAGTTAACTGTTTT
TTCCTACCTAGCAACAGGGCGCTTTTATCCATTTTGTTGG
CTTAACAGTTACTTGGGAATGTTCCGCAGGTAGTGTCTAG
GTAGAGAGATAACTTGCTCGTTTATTGGATCACGGCGACT
AGATAGTTGCTGCAAACTGTAAAAACGGCAGTATCGGACA
GGTGACTGCGGCTCAAAGCTGTCGGAGGACATGGAATCCA
CAAAGGCTGGTGGAGTAATAGCTTACATTAGCTCCTCAAG
CTCAGCCTCCAGTCCAGAGTCGTGCCACAGTGACTCCTCC
AACAGCAGCTTTCAGTCCTGCTCTCCACCCCATACAGGGC
AGGGCCAAGGCGAGACCCTTCATGTGGCCTCTCATTCTCG
CCCACCAAGGCATGGTGGAGGGAAAGCACGATCACTCTCC
TCCACCAAAAGTGGCATTACAAGGTTTCTTCAGGAGGAGC
ATTCAGCAGAACATTCAGTATAAGAAGTGCCTTAAGAACG
AAAGCTGTCCCATTATGCGCATCAACAGGAACCGATGCCA
ACAGTGCCGTTTCAAGAAGTGTCTGCTTGTGGGCATGTCA
AGAGATGCTGTGCGTTTTGGCCGGATTCCCAAACGAGAAA
AGCAACGCATGCTGCTTGAGATGCAGAATGCTATGAACAA
TATGATGAACAACAGCCACG

OTTDART00000030475 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000030475|OTTDARG00000023405|ZDB-GENE-990415-244 nr1d2b|OTTDARP00000042257 nr1d2b-002 LG_ BX927163.32 Danio rerio protein_coding KNOWN, 900 bp
GCAGCCGACGCTCAGTTTCGCTCTATTCGCCCTACGTGCG
CCCACACAGTGTTAAACCGAGGCTCGTTTTATTCAGAAAA
CCGATCTACAGCAAGCTGAGTTTTTGACAGACTTGTAACC
GTGTCGTTTTAGGCTCTAATGCTTTTAAATTACGTTTCGG
ACTTCGGATGTCTACTTTTCCAAAACAAAACAATTACAGA
CTTTTTTCCCATGTTTCTAAGAGGATAAGTTAACTGTTTT
TTCCTACCTAGCAACAGGGCGCTTTTATCCATTTTGTTGG
CTTAACAGTTACTTGGGAATGTTCCGCAGGTAGTGTCTAG
GTAGAGAGATAACTTGCTCGTTTATTGGATCACGGCGACT
AGATAGTTGCTGCAAACTGTAAAAACGGCAGTATCGGACA
GGTGACTGCGGCTCAAAGCTGTCGGAGGACATGGAATCCA
CAAAGGCTGGTGGAGTAATAGCTTACATTAGCTCCTCAAG
CTCAGCCTCCAGTCCAGAGTCGTGCCACAGTGACTCCTCC
AACAGCAGCTTTCAGTCCTGCTCTCCACCCCATACAGGGC
AGGGCCAAGGCGAGACCCTTCATGTGGCCTCTCATTCTCG
CCCACCAAGGCATGGTGGAGGGAAAGCACGATCACTCTCC
TCCACCAAAAGTGGCATTACAAGGTTTCTTCAGGAGGAGC
ATTCAGCAGAACATTCAGTATAAGAAGTGCCTTAAGAACG
AAAGCTGTCCCATTATGCGCATCAACAGGAACCGATGCCA
ACAGTGCCGTTTCAAGAAGTGTCTGCTTGTGGGCATGTCA
AGAGATGCTGTGCGTTTTGGCCGGATTCCCAAACGAGAAA
AGCAACGCATGCTGCTTGAGATGCAGAATGCTATGAACAA
TATGATGAACAACAGCCACG

Related Transcripts

Transcripts related to nr1d2b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nr1d2b-202	Ensembl	900 nt
mRNA	nr1d2b-203 (1) Ensembl	Ensembl	3,787 nt	Select Tool ZFIN BLAST
ncRNA	nr1d2b-003 (1) Ensembl	Ensembl	613 nt	Select Tool ZFIN BLAST
ncRNA	nr1d2b-004 (1) Ensembl	Ensembl	753 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations