Transcript

iscub-203

ID

ZDB-TSCRIPT-090929-12438

Name

iscub-203 Nomenclature History

Previous Names

iscub-003
zgc:110331-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

iscub (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142425 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142425.2|gene_biotype:protein_coding|ENSDARG00000026582.8 transcript_biotype:nonsense_mediated_decay gene_symbol:iscub cdna chromosome:GRCz11:5:31860071:31868628:1
GCGGCGTCGCTGGCGAAGAAGTGCGCTGCTCCGCAAATCC
TCAAAACACTTTCAGCTCCAACCTTGAGGACGCAGATTGG
GTATCACAAAAAGGTCGTGGACCACTATGAGAATCCAAGA
AATGTAGGATCTTTGGATAAAAATGCTAAGAATGTTGGCA
CCGGGTTGGTTGGTGCCCCTGCATGTGGAGATGTGATGAA
ACTTCAGGTCGAGGTGGATGAAGCTGGGAAGATTGTGAAT
GCAAAGTTCAAAACTTTTGGCTGTGGCTCTGCTATTGCTT
CCAGCTCTTTGGCTACCGAGTCGATGAGGCCCTCAAGATA
AAAAACACTGAGATCGCTAAAGAGCTTAGCCTTCCTCCAG
TCAAACTGCACTGCTCGATGCTGGCAGAGGATGCTATTAA
AGCAGCTTTGGCCGACTACCGCCTGAAACAGGAAGGTGAA
CCGGTTGAGGAGACAGCTGTGGCCCGCAACTAGGAGGCAC
ATTTGATCCTTTAAATCAGTGGTTCTCAACTGGTGCTTAA
CAACCAAATGGGGTTTCAGATCGGCTCGGATTGGGTCATG
GGCAATAGAGAATTGAAACTACTAAATGCCAGTATCAAAA
TGTGATCAAATATACATGGTTATTGTTCTCTTGGAAGAGA
AAAAGGCAGTTTTATTGTGTGATTGATTTTGCGTATTGTT
GGGTCGACATTGTTTATTCTGAAACATCATTTAGGTCTTG
AAAGCCATTTGAGAAATCCTTGTGATAAGTTTAGACCAAA
GCTCTCCAACTCTTGCACTGTAGCCAGTCTTTTAAAC

OTTDART00000030182 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000030182|OTTDARG00000023202|ZDB-GENE-050417-332 iscub|OTTDARP00000040020 DKEY-202G15.4-003 LG_ CR387979.25 Danio rerio protein_coding KNOWN, 797 bp
GCGGCGTCGCTGGCGAAGAAGTGCGCTGCTCCGCAAATCC
TCAAAACACTTTCAGCTCCAACCTTGAGGACGCAGATTGG
GTATCACAAAAAGGTCGTGGACCACTATGAGAATCCAAGA
AATGTAGGATCTTTGGATAAAAATGCTAAGAATGTTGGCA
CCGGGTTGGTTGGTGCCCCTGCATGTGGAGATGTGATGAA
ACTTCAGGTCGAGGTGGATGAAGCTGGGAAGATTGTGAAT
GCAAAGTTCAAAACTTTTGGCTGTGGCTCTGCTATTGCTT
CCAGCTCTTTGGCTACCGAGTCGATGAGGCCCTCAAGATA
AAAAACACTGAGATCGCTAAAGAGCTTAGCCTTCCTCCAG
TCAAACTGCACTGCTCGATGCTGGCAGAGGATGCTATTAA
AGCAGCTTTGGCCGACTACCGCCTGAAACAGGAAGGTGAA
CCGGTTGAGGAGACAGCTGTGGCCCGCAACTAGGAGGCAC
ATTTGATCCTTTAAATCAGTGGTTCTCAACTGGTGCTTAA
CAACCAAATGGGGTTTCAGATCGGCTCGGATTGGGTCATG
GGCAATAGAGAATTGAAACTACTAAATGCCAGTATCAAAA
TGTGATCAAATATACATGGTTATTGTTCTCTTGGAAGAGA
AAAAGGCAGTTTTATTGTGTGATTGATTTTGCGTATTGTT
GGGTCGACATTGTTTATTCTGAAACATCATTTAGGTCTTG
AAAGCCATTTGAGAAATCCTTGTGATAAGTTTAGACCAAA
GCTCTCCAACTCTTGCACTGTAGCCAGTCTTTTAAAC

Related Transcripts

Transcripts related to iscub

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	iscub-203	Ensembl	797 nt
mRNA	iscub-201 (1) Ensembl	Ensembl	1,063 nt	Select Tool ZFIN BLAST
mRNA	iscub-202 (1) Ensembl	Ensembl	642 nt	Select Tool ZFIN BLAST
ncRNA	iscub-002 (1) Ensembl	Ensembl	711 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations