Transcript

gsr-205

ID

ZDB-TSCRIPT-090929-11729

Name

gsr-205 Nomenclature History

Previous Names

gsr-005
zgc:110010-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

gsr (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000141815 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000141815.2|gene_biotype:protein_coding|ENSDARG00000019236.11 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:14:38865572:38872565:-1
GCTGTCATCTTCCTGCAAACTCCTTGGTCGCAGCATGGCT
TCTGGATCCGTCTCGCGCTTTGATTTTCTGGTGGTCGGCG
GAGGATCCGGTGGGCTGGCCGGTGCGAGGAGAGCGGCTGA
ACTCGGTGCCACCACTGCCGTGATCGAAAGTCACAGACTC
GGAGGTACCTGCGTCAATGTTGGATGTGTTCCTAAAAAGG
TTATGTGGAACACATCCACTCATGCAGAGTATCTCCATGA
TCATGAAGACTATGGATTTGAGGGAGCAAAAGCACATTTC
AGCTGGCAAATCATAAAACACAAAAGGGATGCTTACGTGA
GTCGCCTGAATCAGATTTACAGGAGCAACCTTGAAAAGAG
ATGCCCAAAGTTGGTCTATGGTAACCTTTGATTTGGCCCG
TTATTCCATGTGAAAAGTGAGGGAGAATGATGGAGGTGGT
TGGTGCGAATGCTTTTGACAGGGATCGTCATTTCCAGTTT
AACGGCAAAATTGAGTTTATTCATGGCTATGCAAGGTTCA
CAGATGACCCTGAACCCACAGTTGAAGTCAATGGGAAGAA
ATACACAGCAACCCATATCTTAATCTCCACTGGCGGCCAT
CCATCCACAGTCAGTGAGGATGATGTGCCAGGATCCAGTT
TAGGCATCACCAGTGATGGGTTCTTTGAACTTGAGTCTTG
CCCTAAACGTAGTGTTATAGTTGGAGCAGGCTATATTGCT
GTGGAAATGGCTGGTATTCTTTCCACTCTTGGGTCTAAAA
CGTCCATCATCATACGACAAGGAGGGGTGCTGAGGAACTT
CGATGCCTTGATAAGCTCCAATTGCACCAAAGAATTGCAA
AATAATGGTATTGACTTACGGAAAAATACT

OTTDART00000029320 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000029320|OTTDARG00000022684|ZDB-GENE-050522-116 gsr|OTTDARP00000040050 gsr-005 LG_none BX088707.15,BX005218.6 Danio rerio protein_coding KNOWN, 870 bp
GCTGTCATCTTCCTGCAAACTCCTTGGTCGCAGCATGGCT
TCTGGATCCGTCTCGCGCTTTGATTTTCTGGTGGTCGGCG
GAGGATCCGGTGGGCTGGCCGGTGCGAGGAGAGCGGCTGA
ACTCGGTGCCACCACTGCCGTGATCGAAAGTCACAGACTC
GGAGGTACCTGCGTCAATGTTGGATGTGTTCCTAAAAAGG
TTATGTGGAACACATCCACTCATGCAGAGTATCTCCATGA
TCATGAAGACTATGGATTTGAGGGAGCAAAAGCACATTTC
AGCTGGCAAATCATAAAACACAAAAGGGATGCTTACGTGA
GTCGCCTGAATCAGATTTACAGGAGCAACCTTGAAAAGAG
ATGCCCAAAGTTGGTCTATGGTAACCTTTGATTTGGCCCG
TTATTCCATGTGAAAAGTGAGGGAGAATGATGGAGGTGGT
TGGTGCGAATGCTTTTGACAGGGATCGTCATTTCCAGTTT
AACGGCAAAATTGAGTTTATTCATGGCTATGCAAGGTTCA
CAGATGACCCTGAACCCACAGTTGAAGTCAATGGGAAGAA
ATACACAGCAACCCATATCTTAATCTCCACTGGCGGCCAT
CCATCCACAGTCAGTGAGGATGATGTGCCAGGATCCAGTT
TAGGCATCACCAGTGATGGGTTCTTTGAACTTGAGTCTTG
CCCTAAACGTAGTGTTATAGTTGGAGCAGGCTATATTGCT
GTGGAAATGGCTGGTATTCTTTCCACTCTTGGGTCTAAAA
CGTCCATCATCATACGACAAGGAGGGGTGCTGAGGAACTT
CGATGCCTTGATAAGCTCCAATTGCACCAAAGAATTGCAA
AATAATGGTATTGACTTACGGAAAAATACT

Related Transcripts

Transcripts related to gsr

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	gsr-205	Ensembl	870 nt
mRNA	gsr-201 (1) Ensembl	Ensembl	1,976 nt	Select Tool ZFIN BLAST
mRNA	gsr-202 (1) Ensembl	Ensembl	1,545 nt	Select Tool ZFIN BLAST
mRNA	gsr-206 (1) Ensembl	Ensembl	1,318 nt	Select Tool ZFIN BLAST
mRNA	gsr-207 (1) Ensembl	Ensembl	895 nt	Select Tool ZFIN BLAST
mRNA	gsr-208 (1) Ensembl	Ensembl	660 nt	Select Tool ZFIN BLAST
mRNA	gsr-209 (1) Ensembl	Ensembl	1,290 nt	Select Tool ZFIN BLAST
ncRNA	gsr-003 (1) Ensembl	Ensembl	814 nt	Select Tool ZFIN BLAST
ncRNA	gsr-004 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations