Transcript

smc5-002

ID

ZDB-TSCRIPT-090929-10823

Name

smc5-002 Nomenclature History

Previous Names

zgc:152845-002

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

smc5 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000147693 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000147693.2|gene_biotype:protein_coding|ENSDARG00000044282.9 transcript_biotype:retained_intron gene_symbol:smc5 cdna chromosome:GRCz11:10:15622898:15631358:-1
GGCGACAGCTGGAGGAGCAGCTGAGGGCAGCAGAAAGGCA
GAAGCAGAGCATTGATCAGCGGATGGCAGCCATCCGGGAG
CAGCAAGCTAACCTGGACCGTCGTGATAATGAGCTGCGTG
CTAATAAGAAGAAACTGTCTGATCTGAAAAGCAAGAAGAG
ACAACTGGAGCAGAAAATCAGCACAAAACAGGACAGCTTG
AGGCAGATGGAGCAGAATGAGATCAACTTGGTGGCAATCG
AAGAGGAAGCGAATGCCAAGATTGCTGCTGTCAACAACAA
GAAAGTGACCATAATGGGGGAGTATTTGAGTCACCTGCAG
TCAAAGGCCAGGCTGAATATGGAGAAGGTGTATTTGGCTC
TCCAGAGCGCAGGTCTCAGTGCTGAGAAAACCAAACTGGA
GACGGACGTTCGAGAAAGTTCAGCTGAACTCAAGAGAGCA
GAGGTAGACTATACCAAGCTGGACAAGATAAAGACCAATC
TGTTGATGACTTGTAAGACCCTGATGAAACGGGCCAGTGA
GATCTGTAACATGACTCCAGGAGAGACGGCCGTCCCGGAA
GAACTACATGCAGTGAGCTCAGTCTACTCAGACTCCCCTA
CCTCTGCTTCATTCAAGCTTGAATCATGTATCACATGACA
TCGCATGTGTGTGCTTTCTTTTCAGGCTTTCAGCTTGTTG
CCTGAGACTCTGGATGAGATCGATGCCATGCTGAATGAGG
AAAGAACCAGAGCTGAGTGTTTCACAGGCCTCAGTGATGC
TGTGGTGGATGAATATAACAGGCGTGAG

OTTDART00000028325 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000028325|OTTDARG00000022074|ZDB-GENE-061013-288 smc5|no_translation CH211-117O11.2-002 LG_ BX640501.15 Danio rerio protein_coding KNOWN, 788 bp
GGCGACAGCTGGAGGAGCAGCTGAGGGCAGCAGAAAGGCA
GAAGCAGAGCATTGATCAGCGGATGGCAGCCATCCGGGAG
CAGCAAGCTAACCTGGACCGTCGTGATAATGAGCTGCGTG
CTAATAAGAAGAAACTGTCTGATCTGAAAAGCAAGAAGAG
ACAACTGGAGCAGAAAATCAGCACAAAACAGGACAGCTTG
AGGCAGATGGAGCAGAATGAGATCAACTTGGTGGCAATCG
AAGAGGAAGCGAATGCCAAGATTGCTGCTGTCAACAACAA
GAAAGTGACCATAATGGGGGAGTATTTGAGTCACCTGCAG
TCAAAGGCCAGGCTGAATATGGAGAAGGTGTATTTGGCTC
TCCAGAGCGCAGGTCTCAGTGCTGAGAAAACCAAACTGGA
GACGGACGTTCGAGAAAGTTCAGCTGAACTCAAGAGAGCA
GAGGTAGACTATACCAAGCTGGACAAGATAAAGACCAATC
TGTTGATGACTTGTAAGACCCTGATGAAACGGGCCAGTGA
GATCTGTAACATGACTCCAGGAGAGACGGCCGTCCCGGAA
GAACTACATGCAGTGAGCTCAGTCTACTCAGACTCCCCTA
CCTCTGCTTCATTCAAGCTTGAATCATGTATCACATGACA
TCGCATGTGTGTGCTTTCTTTTCAGGCTTTCAGCTTGTTG
CCTGAGACTCTGGATGAGATCGATGCCATGCTGAATGAGG
AAAGAACCAGAGCTGAGTGTTTCACAGGCCTCAGTGATGC
TGTGGTGGATGAATATAACAGGCGTGAG

Related Transcripts

Transcripts related to smc5

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	smc5-201 (1) Ensembl	Ensembl	2,447 nt	Select Tool
mRNA	smc5-202 (1) Ensembl	Ensembl	3,966 nt	Select Tool ZFIN BLAST
mRNA	smc5-203 (1) Ensembl	Ensembl	1,384 nt	Select Tool
mRNA	smc5-206 (1) Ensembl	Ensembl	3,831 nt	Select Tool ZFIN BLAST
ncRNA	smc5-002	Ensembl	788 nt
ncRNA	smc5-003 (1) Ensembl	Ensembl	731 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations