PUBLICATION
Snail3 orthologues in vertebrates: divergent members of the Snail zinc-finger gene family
- Authors
- Manzanares, M., Blanco, M.J., and Nieto, M.A.
- ID
- ZDB-PUB-061108-1
- Date
- 2004
- Source
- Development genes and evolution 214(1): 47-53 (Journal)
- Registered Authors
- Nieto, Angela
- Keywords
- Snail, Smuc, ZNF313, Gene duplication, Synteny
- MeSH Terms
-
- Amino Acid Sequence
- Animals
- Conserved Sequence/genetics
- Evolution, Molecular
- Gene Expression Regulation, Developmental
- Genetic Linkage
- Humans
- Mice
- Molecular Sequence Data
- Multigene Family/genetics
- Transcription Factors/chemistry*
- Transcription Factors/genetics*
- Zebrafish/embryology
- Zebrafish/genetics*
- Zebrafish Proteins/chemistry*
- Zebrafish Proteins/genetics*
- Zinc Fingers*
- PubMed
- 14655014 Full text @ Dev. Genes Evol.
Citation
Manzanares, M., Blanco, M.J., and Nieto, M.A. (2004) Snail3 orthologues in vertebrates: divergent members of the Snail zinc-finger gene family. Development genes and evolution. 214(1):47-53.
Abstract
Snail genes comprise a family of zinc-finger transcription factor coding genes with multiple roles in early embryonic development of metazoans. The evolutionary history of this family has been studied in detail, revealing an initial duplication in Snail and Scratch genes preceding the protostome/deuterostome split, and posterior independent duplication events in the lineages leading to insects and vertebrates. The distribution of mammalian and teleost Snail genes fits with current models for whole genome duplication events at the base of the vertebrate lineage, plus an extra duplication in teleosts. However, two very divergent Snail genes, one from mammals and the other from teleost fishes, fit poorly into the phylogenetic analysis of the family. By means of database mining and synteny analysis, we provide evidence for these genes being orthologues, and evidence that they originated in an early duplication at the base of the vertebrates resulting in three and not two Snail genes. We further show that all three Snail genes lie in regions of extensive paralogy, revealing their common origin through segmental or chromosomal duplication.
Genes / Markers
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Orthology
Engineered Foreign Genes
Mapping