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Figure 4—figure supplement 1. Standard variance and principal component comparisons for scRNA-seq analysis.

(A) Plots of standard deviation against the number of principal components using whole embryo scRNA-seq data quantified using indicated annotation. Standard deviation values for 75 principal components are shown in both cases. (B) Plots of cumulative variation against the number of principal components from scRNA-seq data quantified using indicated annotation. Total cumulative variance values for 75 principal components are shown in each case. (C) Histogram plot of the number of genes per cluster. The bin size is 50. No clusters have 0 genes. (D) Histogram showing the number of cells per cluster. The bin size is 100. No clusters have 0 cells.

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