ZFIN ID: ZDB-GENE-990415-97
Gene Name: homeobox A10b
Gene Symbol: hoxa10b    Nomenclature History

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Previous Names: Hoxa-10, hoxa10, z-140

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to have sequence-specific DNA binding activity. Predicted to be involved in multicellular organism development and regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Is expressed in several structures, including CNS interneuron; chondroblast; mesenchyme; myoblast; and pectoral fin bud. Orthologous to human HOXA10 (homeobox A10).
Genome Resources: Alliance (1),  Gene:30391 (1),  Ensembl(GRCz11):ENSDARG00000031337 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa42704 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxa10b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxa10b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001356 Homeobox domain
    Homologous_superfamily IPR009057 Homeobox-like domain superfamily
    Conserved_site IPR017970 Homeobox, conserved site
    Domain IPR020479 Homeobox domain, metazoa
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hoxa10b-201 (1)    Ensembl 1649
    ottdart00000001853 (1) 1232
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hoxa10b
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(hoxa10b-E1B:EGFP) E1Bhoxa10b EGFP Danio rerio 1 2
    MARKER RELATIONSHIPS
    hoxa10b Contained in: [BAC] DKEY-45E15 (1) (order this)
    [PAC] BUSM1-31B14 (1)
    hoxa10b Encodes: [cDNA] MGC:193973 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131155 (1) 1232 bp
    Genomic GenBank:CR392024 (1) 183486 bp
    Select Tool
    Polypeptide UniProtKB:B3DGC1 (1) 330 aa
    Sequence Information (all 21)
    ORTHOLOGY for hoxa10b ( Chr: 16 )
    CITATIONS (50)