ZFIN ID: ZDB-GENE-990415-78
Gene Name: forkhead box A1
Gene Symbol: foxa1
Sequence Ontology ID : SO:0000704

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Previous Names: fkd7 (1), forkhead-7

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
GENE EXPRESSION
All Expression Data: 59 figures from 50 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [MGC:65744]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 2 figures from Lai et al., 2016
Observed in:
DISEASE ASSOCIATED WITH foxa1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH foxa1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process axial mesoderm morphogenesis (more)
Cellular Component nucleus (more)
Molecular Function transcription regulatory region sequence-specific DNA binding (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001766 (1)
  • InterPro:IPR013638 (1)
  • InterPro:IPR018122 (1)
  • InterPro:IPR018533 (1)
  • InterPro:IPR030456 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00657 (1)
  • PROSITE:PS00658 (1)
  • PROSITE:PS50039 (1)
  • Pfam:PF00250 (1)
  • Pfam:PF08430 (1)
  • Pfam:PF09354 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxa1-001 (1) 1891
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM foxa1 No data available
    MARKER RELATIONSHIPS
    foxa1Contained in: [BAC] DKEYP-114A12 (1)
    foxa1Encodes: [cDNA] MGC:65744 (1) (order this), MGC:76828 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131284 (1) 1878bp
    Genomic GenBank:CR753895 (1) 173508bp
    Select Tool
    Polypeptide UniProtKB:Q6P0C9 (1) 427aa
    Sequence Clusters UniGene:75817 (1)
    Sequence Information (all 18)
    OTHER foxa1 GENE PAGES
  • Alliance (1)
  • Gene:30541 (1)
  • VEGA:OTTDARG00000020109 (1)
  • Ensembl(GRCz11):ENSDARG00000102138 (1)
  • ORTHOLOGY for foxa1 (Chr: 17)
    CITATIONS (94)