ZFIN ID: ZDB-GENE-990415-255
Gene Name: snail family zinc finger 1a
Gene Symbol: snai1a    Nomenclature History

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Previous Names: sna-1 (1), sna1 (1), snail1, snail1a (1), cb643 (1), zgc:109820

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Exhibits NF-kappaB binding activity. Involved in ameboidal-type cell migration; dorsal/ventral pattern formation; and epithelial to mesenchymal transition. Localizes to nucleus. Is expressed in several structures, including blastodisc; germ ring; mesoderm; musculature system; and pharyngeal arch. Orthologous to human SNAI1 (snail family transcriptional repressor 1).
Genome Resources: Alliance (1),  Gene:30273 (1),  Ensembl(GRCz11):ENSDARG00000056995 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010250Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la017795Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la017796Tg Transgenic Insertion Unknown Unknown DNA
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-snai1a N/A 2
    MO2-snai1a N/A 6
    MO3-snai1a N/A 2
    MO4-snai1a N/A 1
    DISEASE ASSOCIATED WITH snai1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snai1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dorsal/ventral pattern formation (more)
    Cellular Component nucleus (more)
    Molecular Function NF-kappaB binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snai1a-201 (1)    Ensembl 986
    snai1a-202 (1)    Ensembl 1942
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM snai1a
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(hsp70l:FLAG-dnsnai1a) hsp70l FLAGsnai1a Danio rerio 1 2
    MARKER RELATIONSHIPS
    snai1a Contained in: [BAC] CH211-25D12 (1), CH211-232B12 (1)
    snai1a Encodes: [EST] cb643 (2) (order this)
    [cDNA] MGC:55277 (1), MGC:109820 (1), MGC:173651 (1), MGC:191765 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_131066 (1) 1950 nt
    Genomic GenBank:CR555298 (1) 183135 nt
    Select Tool
    Polypeptide UniProtKB:Q91367 (1) 263 aa
    Sequence Information (all 33)
    ORTHOLOGY for snai1a ( Chr: 11 )
    CITATIONS (107)