Gene
hoxc5a
- ID
- ZDB-GENE-980526-533
- Name
- homeobox C5a
- Symbol
- hoxc5a Nomenclature History
- Previous Names
-
- hox-3.4
- hoxc5
- ZF-25
- etID309822.23 (1)
- z-142
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification. Predicted to localize to nucleus. Orthologous to human HOXC5 (homeobox C5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR001827 | Homeobox protein, antennapedia type, conserved site |
| Conserved_site | IPR017970 | Homeobox, conserved site |
| Domain | IPR001356 | Homeodomain |
| Domain | IPR020479 | Homeodomain, metazoa |
| Family | IPR017995 | Homeobox protein, antennapedia type |
| Family | IPR050296 | Antennapedia-type homeobox |
| Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
Domain Details Per Protein
| Protein | Length | Antennapedia-type homeobox | Homedomain-like superfamily | Homeobox, conserved site | Homeobox protein, antennapedia type | Homeobox protein, antennapedia type, conserved site | Homeodomain | Homeodomain, metazoa |
|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9PSV4
|
168 | |||||||
|
UniProtKB:P09074
|
232 | |||||||
|
UniProtKB:B3DIP7
|
233 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hoxc5a-201
(1)
|
Ensembl | 956 nt |
Interactions and Pathways
No data available
Plasmids