header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-980526-312
Gene Name: muscle segment homeobox 1a
Gene Symbol: msx1a
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: msh-E, mshE, msx1 (1), msxe (1), cb435 (1), id:ibd5099, zgc:111928

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in otic placode formation. Predicted to localize to the nucleus. Human ortholog(s) of this gene  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH msx1a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
orofacial cleft 5 Orofacial cleft 5 608874
tooth agenesis Tooth agenesis, selective, 1, with or without orofacial cleft 106600
tooth and nail syndrome Ectodermal dysplasia 3, Witkop type 189500
DISEASE ASSOCIATED WITH msx1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process otic placode formation (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 7)
TRANSCRIPTS No data available
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM msx1a No data available
MARKER RELATIONSHIPS
msx1a Encodes: [EST] cb435 (1) (order this), ibd5099 (order this)
[cDNA] MGC:111928 (1) (order this), MGC:193880 (1) (order this), MGC:193889 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001033589 (1)
Polypeptide UniProtKB:B3DG59 (1) 233 aa
Sequence Clusters UniGene:75086 (1)
Sequence Information (all 24)
OTHER msx1a GENE PAGES
  • Alliance (1)
  • Gene:30527 (1)
  • Ensembl(GRCz11):ENSDARG00000116118 (1)
  • ORTHOLOGY for msx1a ( Chr: 14 )
    CITATIONS (58)