Gene

ascl1b

ID
ZDB-GENE-980526-174
Name
achaete-scute family bHLH transcription factor 1b
Symbol
ascl1b Nomenclature History
Previous Names
  • ashb
  • Zash-1b (1)
  • zashb
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to contribute to DNA-binding transcription factor activity. Involved in chordate embryonic development; endocrine pancreas development; and hindbrain morphogenesis. Predicted to localize to RNA polymerase II transcription factor complex. Human ortholog(s) of this gene implicated in congenital central hypoventilation syndrome. Is expressed in several structures, including central nervous system; neural plate; neural tube; neurons; and posterior neural keel. Orthologous to several human genes including ASCL2 (achaete-scute family bHLH transcription factor 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
65 figures from 39 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ascl1b Human Ortholog
No data available
Associated With ascl1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Domain IPR020859 Roc domain
Domain IPR032171 C-terminal of Roc (COR) domain
Family IPR050216 Leucine-rich repeat domain-containing protein
Family IPR050283 E-box Binding Transcriptional Regulators
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Homologous_superfamily IPR036638 Helix-loop-helix DNA-binding domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Repeat IPR025875 Leucine rich repeat 4
Domain Details Per Protein
Protein Length C-terminal of Roc (COR) domain E-box Binding Transcriptional Regulators Helix-loop-helix DNA-binding domain superfamily Leucine-rich repeat Leucine rich repeat 4 Leucine-rich repeat domain-containing protein Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype Myc-type, basic helix-loop-helix (bHLH) domain P-loop containing nucleoside triphosphate hydrolase Roc domain Winged helix-like DNA-binding domain superfamily
UniProtKB:Q90260 195
UniProtKB:E7F965 829
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ascl1b-203 (1) Ensembl 1,273 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations