ZFIN is now using GRCz12tu for Genomic Data
Gene
si:ch73-233f7.1
- ID
- ZDB-GENE-141215-5
- Name
- si:ch73-233f7.1
- Symbol
- si:ch73-233f7.1 Nomenclature History
- Previous Names
-
- fj33e10
- wu:fj33e10
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cell adhesion molecule binding activity. Predicted to be involved in cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020894 | Cadherin conserved site |
| Domain | IPR002126 | Cadherin-like |
| Domain | IPR013164 | Cadherin, N-terminal |
| Domain | IPR032455 | Cadherin, cytoplasmic C-terminal domain |
| Family | IPR050174 | Protocadherin/Cadherin-related Cell Adhesion |
| Homologous_superfamily | IPR015919 | Cadherin-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin conserved site | Cadherin, cytoplasmic C-terminal domain | Cadherin-like | Cadherin-like superfamily | Cadherin, N-terminal | Protocadherin/Cadherin-related Cell Adhesion |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4IET8 | InterPro | 984 | ||||||
| UniProtKB:E7F647 | InterPro | 1015 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch73-233f7.1-201
(1)
|
Ensembl | 7,713 nt | ||
| mRNA |
si:ch73-233f7.1-202
(1)
|
Ensembl | 3,648 nt | ||
| mRNA |
si:ch73-233f7.1-203
(1)
|
Ensembl | 4,176 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance