Gene
lypc
- ID
- ZDB-GENE-131127-361
- Name
- ly6 domain containing, pigment cell
- Symbol
- lypc Nomenclature History
- Previous Names
-
- si:ch73-156o22.2
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Acts upstream of or within circadian rhythm. Predicted to be located in membrane. Is expressed in eye; heart; integument; intestine; and post-vent region.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from Li et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Ly-6 antigen/uPA receptor-like | Snake toxin-like superfamily |
---|---|---|---|---|
UniProtKB:X1WGJ5 | InterPro | 126 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH73-156O22 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001386300 (1) | 1136 nt | ||
Genomic | GenBank:CU695006 (1) | 43506 nt | ||
Polypeptide | UniProtKB:X1WGJ5 (1) | 126 aa |
No data available
- Fujihara, Y., Herberg, S., Blaha, A., Panser, K., Kobayashi, K., Larasati, T., Novatchkova, M., Theussl, H.C., Olszanska, O., Ikawa, M., Pauli, A. (2021) The conserved fertility factor SPACA4/Bouncer has divergent modes of action in vertebrate fertilization. Proceedings of the National Academy of Sciences of the United States of America. 118(39):
- Herberg, S., Gert, K.R., Schleiffer, A., Pauli, A. (2018) The Ly6/uPAR protein Bouncer is necessary and sufficient for species-specific fertilization. Science (New York, N.Y.). 361:1029-1033
- Li, L., Ji, D., Teng, L., Zhang, S., Li, H. (2015) Identification and expression of Lypc, a novel dark-inducible member of Ly6 superfamily in zebrafish Danio rerio. Gene. 574(1):69-75
- Ji, D., Liu, P., Wang, F., Zhang, S., and Li, H. (2012) Identification and expression of a novel member of Ly-6 superfamily in zebrafish Denio rerio. Development genes and evolution. 222(2):119-124
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