ZFIN is now using GRCz12tu for Genomic Data
Gene
col28a2b
- ID
- ZDB-GENE-130530-762
- Name
- collagen, type XXVIII, alpha 2b
- Symbol
- col28a2b Nomenclature History
- Previous Names
-
- col28a1l
- zmp:0000000759 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be located in basement membrane. Predicted to be part of collagen type XXVIII trimer. Is expressed in integument; intestine; liver; and thymus. Orthologous to human COL28A1 (collagen type XXVIII alpha 1 chain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from Gebauer et al., 2016
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
| Protein | Additional Resources | Length |
|---|---|---|
| UniProtKB:A0A0G2L8G8 | InterPro | 1142 |
| UniProtKB:A0A8M9Q6B7 | InterPro | 1195 |
| UniProtKB:A0AC58JT53 | InterPro | 1195 |
| UniProtKB:A0AC58JT59 | InterPro | 1195 |
| UniProtKB:A0AC58JT60 | InterPro | 1195 |
| UniProtKB:A0AC58JT61 | InterPro | 1195 |
| UniProtKB:A0AC58JT74 | InterPro | 1195 |
| UniProtKB:A0AC58JT75 | InterPro | 1195 |
| UniProtKB:A0AC58JT90 | InterPro | 1195 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
col28a2b-201
(1)
|
Ensembl | 3,426 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-col28a2b | Rabbit |
|
1 |
Plasmids
No data available
- Genome Browsers