ZFIN is now using GRCz12tu for Genomic Data
Gene
trappc8
- ID
- ZDB-GENE-130530-601
- Name
- trafficking protein particle complex subunit 8
- Symbol
- trappc8 Nomenclature History
- Previous Names
-
- zmp:0000000598 (1)
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be part of TRAPPIII protein complex. Orthologous to human TRAPPC8 (trafficking protein particle complex subunit 8).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR057651 | TPPC8, C-terminal Ig-like domain |
| Domain | IPR058538 | TPPC8, second Ig-like domain |
| Domain | IPR058540 | TPPC8, third Ig-like domain |
| Domain | IPR058541 | TPPC8, first Ig-like domain |
| Family | IPR024420 | TRAPP III complex, Trs85 |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Tetratricopeptide-like helical domain superfamily | TPPC8, C-terminal Ig-like domain | TPPC8, first Ig-like domain | TPPC8, second Ig-like domain | TPPC8, third Ig-like domain | TRAPP III complex, Trs85 |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7FA12 | InterPro | 1478 | ||||||
| UniProtKB:A0A8M6Z2T8 | InterPro | 1317 | ||||||
| UniProtKB:A0A8M6YUB1 | InterPro | 1450 | ||||||
| UniProtKB:A0A8M6Z3E9 | InterPro | 1473 | ||||||
| UniProtKB:A0AC58I7E9 | InterPro | 1317 | ||||||
| UniProtKB:A0AA58BSJ9 | InterPro | 1478 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trappc8-201
(1)
|
Ensembl | 4,437 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance