Gene

rnf20

ID
ZDB-GENE-130404-2
Name
ring finger protein 20, E3 ubiquitin protein ligase
Symbol
rnf20 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity and ubiquitin-protein transferase activity. Predicted to be involved in histone monoubiquitination. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in breast cancer. Orthologous to human RNF20 (ring finger protein 20).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rnf20 Human Ortholog
No data available
Associated With rnf20 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR001841 Zinc finger, RING-type
Domain IPR018957 Zinc finger, C3HC4 RING-type
Family IPR013956 E3 ubiquitin ligase Bre1
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Domain Details Per Protein
Protein Length E3 ubiquitin ligase Bre1 Zinc finger, C3HC4 RING-type Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:F1R926 1013
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnf20-201 (1) Ensembl 3,867 nt
mRNA rnf20-203 (1) Ensembl 5,443 nt
ncRNA rnf20-002 (1) Ensembl 1,232 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations