Gene

soul4

ID

ZDB-GENE-110718-1

Name

heme-binding protein soul4

Symbol

soul4 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to have heme binding activity. Is expressed in blastomere; nervous system; otic vesicle; and pronephric duct.

Genome Resources

Note

Represented by ENSDARG00000074783.

Comparative Information

Expression

All Expression Data

2 figures from Fortunato et al., 2011

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With soul4 Human Ortholog

No data available

Associated With soul4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR006917	SOUL haem-binding protein
Homologous_superfamily	IPR011256	Regulatory factor, effector binding domain superfamily

Domain Details Per Protein

Protein	Length	Regulatory factor, effector binding domain superfamily	SOUL haem-binding protein
UniProtKB:F2XG13 InterPro	250

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	soul4-202 (1) Ensembl	Ensembl		1,320 nt	Select Tool ZFIN BLAST
ncRNA	soul4-002 (1) Ensembl	Ensembl		387 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations