Gene

cbx6b

ID
ZDB-GENE-110613-1
Name
chromobox homolog 6b
Symbol
cbx6b Nomenclature History
Previous Names
  • si:ch211-260m3.3
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Involved in hematopoietic progenitor cell differentiation. Predicted to localize to nucleus. Orthologous to human CBX6 (chromobox 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Raby et al., 2020
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Huang et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cbx6b Human Ortholog
No data available
Associated With cbx6b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR023779 Chromo domain, conserved site
Conserved_site IPR033773 CBX family C-terminal motif
Domain IPR000953 Chromo/chromo shadow domain
Domain IPR023780 Chromo domain
Family IPR001759 Pentraxin-related
Family IPR052458 Polycomb group PRC1-like complex component
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR016197 Chromo-like domain superfamily
Domain Details Per Protein
Protein Length CBX family C-terminal motif Chromo/chromo shadow domain Chromo domain Chromo domain, conserved site Chromo-like domain superfamily Concanavalin A-like lectin/glucanase domain superfamily Pentraxin-related Polycomb group PRC1-like complex component
UniProtKB:A0A8M9PZU0 1058
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cbx6b-201 (1) Ensembl 1,509 nt
mRNA cbx6b-202 (1) Ensembl 752 nt
mRNA cbx6b-203 (1) Ensembl 859 nt
mRNA cbx6b-204 (1) Ensembl 1,522 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations