ZFIN is now using GRCz12tu for Genomic Data
Gene
ccdc39
- ID
- ZDB-GENE-110603-1
- Name
- coiled-coil domain 39 molecular ruler complex subunit
- Symbol
- ccdc39 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Involved in cilium-dependent cell motility and epithelial cilium movement involved in determination of left/right asymmetry. Acts upstream of or within determination of left/right symmetry. Predicted to be located in extracellular region. Predicted to be active in axoneme. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 14. Orthologous to human CCDC39 (coiled-coil domain 39 molecular ruler complex subunit).
- Genome Resources
-
- Alliance (1)
- Gene:100005620 (1)
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
-
- GEO (1) Expression Atlas (1) Single Cell Expression Atlas (1) Daniocell (1)
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Merveille et al., 2011
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| primary ciliary dyskinesia 14 | Alliance | Ciliary dyskinesia, primary, 14 | 613807 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR033290 | Coiled-coil domain-containing protein 39 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Coiled-coil domain-containing protein 39 |
|---|---|---|---|
| UniProtKB:P0CK98 | InterPro | ||
| UniProtKB:A0A8M1PVA8 | InterPro | 191 | |
| UniProtKB:A0AB13AA07 | InterPro | 191 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance