header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-110411-166
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: U-box domain containing 5
Gene Symbol: ubox5    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: si:ch73-368o6.1

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have ubiquitin protein ligase binding activity and ubiquitin-ubiquitin ligase activity. Predicted to be involved in protein polyubiquitination. Predicted to localize to the nucleus. Orthologous to human UBOX5 (U-box domain containing 5).
Genome Resources: Alliance (1),  Gene:402829 (1),  Ensembl(GRCz11):ENSDARG00000058563 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ubox5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ubox5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein ubiquitination (more)
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001841 (1)
  • InterPro:IPR003613 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR039847 (1)
  • InterPro:IPR039925 (1)
  • PROSITE:PS00518 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS51698 (1)
  • Pfam:PF04564 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ubox5-201 (1)    Ensembl 1602
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ubox5 No data available
    MARKER RELATIONSHIPS
    ubox5 Contained in: [BAC] CH73-368O6 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001328062 (1)
    Select Tool
    Genomic GenBank:CU469500 (1) 112831 bp
    Select Tool
    Polypeptide UniProtKB:Q7SXH2 (1) 492 aa
    Select Tool
    Sequence Clusters UniGene:84915 (1)
    Sequence Information (all 11)
    ORTHOLOGY for ubox5 ( Chr: 8 )
    CITATIONS (12)