ZFIN is now using GRCz12tu for Genomic Data
Gene
slc16a6a
- ID
- ZDB-GENE-110208-1
- Name
- solute carrier family 16 member 6a
- Symbol
- slc16a6a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Ambiguous Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables monocarboxylic acid transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in head; intestinal bulb; liver; pronephros; and swim bladder. Orthologous to human SLC16A6 (solute carrier family 16 member 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Hugo et al., 2012
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Major facilitator superfamily | Major facilitator superfamily domain | MFS transporter superfamily | Monocarboxylate transporter 7 | Proton-linked Monocarboxylate Transporter |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4IHG0 | InterPro | ||||||
| UniProtKB:H6WYF6 | InterPro | 495 | |||||
| UniProtKB:A0A8M3AX51 | InterPro | 340 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc16a6-204
(1)
|
Ensembl | 1,670 nt | ||
| ncRNA |
slc16a6a-002
(1)
|
Ensembl | 667 nt | ||
| ncRNA |
slc16a6a-003
(1)
|
Ensembl | 556 nt | ||
| pseudogenic transcript |
fp885542.2-201
(1)
|
Ensembl | 3,169 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-slc16a6a | polyclonal | Rabbit |
|
1 |
Plasmids
No data available
- Genome Browsers