ZFIN is now using GRCz12tu for Genomic Data

Gene

ntng1a

ID

ZDB-GENE-091118-13

Name

netrin g1a

Symbol

ntng1a Nomenclature History

Previous Names

ntng1 (1)
si:ch211-223f21.1

Type

protein_coding_gene

Location

Chr: 24 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to be involved in animal organ morphogenesis; axonogenesis; and tissue development. Predicted to be located in basement membrane. Orthologous to human NTNG1 (netrin G1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ntng1a Human Ortholog

No data available

Associated With ntng1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000742	EGF-like domain
Domain	IPR002049	Laminin-type EGF domain
Domain	IPR008211	Laminin, N-terminal
Domain	IPR056863	Laminin/attractin/netrin-like, EGF domain
Family	IPR050440	Laminin/Netrin Extracellular Matrix

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M3APC6	InterPro	464
UniProtKB:A0A8M3AW46	InterPro	509
UniProtKB:A0A8M3APC3	InterPro	524
UniProtKB:A0A8M3B6S1	InterPro	545
UniProtKB:A0A8M3AW50	InterPro	459
UniProtKB:A0A8M3AZ87	InterPro	463
UniProtKB:A0A8M6Z4S4	InterPro	500
UniProtKB:A0A8M6YVP9	InterPro	508
UniProtKB:A0A8M3AZ83	InterPro	523
UniProtKB:A0A8M9PUJ1	InterPro	504
UniProtKB:A0A8M9PGG9	InterPro	444
UniProtKB:A0A8M3B6S5	InterPro	478
UniProtKB:A0A8M3ANP5	InterPro	479
UniProtKB:A0A8M9P669	InterPro	489
UniProtKB:A0AC58IRX2	InterPro	545
UniProtKB:A0AC58IRX6	InterPro	523
UniProtKB:A0AC58IRX9	InterPro	478
UniProtKB:A0AC58IRY0	InterPro	478
UniProtKB:A0AC58IRY2	InterPro	464
UniProtKB:A0AC58IRY3	InterPro	479
UniProtKB:A0AC58IRY4	InterPro	489
UniProtKB:A0AC58IRY7	InterPro	524
UniProtKB:A0AC58IRY8	InterPro	459
UniProtKB:A0AC58IRY9	InterPro	479
UniProtKB:A0AC58IRZ0	InterPro	509
UniProtKB:A0AC58IRZ1	InterPro	459
UniProtKB:A0AC58IRZ9	InterPro	459
UniProtKB:A0AC58IS19	InterPro	504
UniProtKB:A0AC58IS29	InterPro	504

Transcripts

Genome Browsers

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ntng1a-201 (1) Ensembl	Ensembl	1,049 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-203 (1) Ensembl	Ensembl	1,258 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-204 (1) Ensembl	Ensembl	903 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-205 (1) Ensembl	Ensembl	1,338 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-206 (1) Ensembl	Ensembl	1,353 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-207 (1) Ensembl	Ensembl	1,344 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-208 (1) Ensembl	Ensembl	1,641 nt	Select Tool ZFIN BLAST
mRNA	ntng1a-209 (1) Ensembl	Ensembl	1,230 nt	Select Tool ZFIN BLAST
ncRNA	ntng1a-002 (1) Ensembl	Ensembl	708 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations