ZFIN is now using GRCz12tu for Genomic Data
Gene
spata13
- ID
- ZDB-GENE-091116-25
- Name
- spermatogenesis associated 13
- Symbol
- spata13 Nomenclature History
- Previous Names
-
- si:dkey-33c18.3
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in filopodium assembly and lamellipodium assembly. Predicted to be active in cytosol. Orthologous to human SPATA13 (spermatogenesis associated 13).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000219 | Dbl homology domain |
| Domain | IPR001452 | SH3 domain |
| Domain | IPR001849 | Pleckstrin homology domain |
| Domain | IPR055251 | SOS1/NGEF-like, PH domain |
| Homologous_superfamily | IPR011993 | PH-like domain superfamily |
| Homologous_superfamily | IPR035899 | Dbl homology (DH) domain superfamily |
| Homologous_superfamily | IPR036028 | SH3-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Dbl homology (DH) domain superfamily | Dbl homology domain | PH-like domain superfamily | Pleckstrin homology domain | SH3 domain | SH3-like domain superfamily | SOS1/NGEF-like, PH domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2B9P0 | InterPro | 1251 | |||||||
| UniProtKB:A0A8M9PX66 | InterPro | 1223 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
spata13-201
(1)
|
Ensembl | 4,480 nt | ||
| mRNA |
spata13-202
(1)
|
Ensembl | 5,572 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers