Gene

pcdh1b

ID
ZDB-GENE-091015-2
Name
protocadherin 1b
Symbol
pcdh1b Nomenclature History
Previous Names
  • pcdh1 (1)
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Is expressed in nervous system. Orthologous to human PCDH1 (protocadherin 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from Blevins et al., 2011
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pcdh1b Human Ortholog
No data available
Associated With pcdh1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020894 Cadherin conserved site
Domain IPR002126 Cadherin-like
Domain IPR013585 Protocadherin
Family IPR050174 Protocadherin/Cadherin-related Cell Adhesion
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin conserved site Cadherin-like Cadherin-like superfamily Protocadherin Protocadherin/Cadherin-related Cell Adhesion
UniProtKB:E7F376 1093
UniProtKB:A0A8M3AI27 1211
UniProtKB:A0A8M9Q1N5 1064
UniProtKB:A0A140LGZ8 1093
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pcdh1b-201 (1) Ensembl 4,563 nt
mRNA pcdh1b-202 (1) Ensembl 6,717 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations