Gene
ehbp1
- ID
- ZDB-GENE-091006-4
- Name
- EH domain binding protein 1
- Symbol
- ehbp1 Nomenclature History
- Previous Names
-
- fc92e03
- si:ch211-63b16.5
- wu:fc92e03
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Is expressed in telencephalon. Orthologous to human EHBP1 (EH domain binding protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Diotel et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa2907 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa11211 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa42932 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa42933 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa42934 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa42935 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa44873 | Allele with one point mutation | Unknown | Unknown | ENU |
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No data available
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| prostate cancer | Alliance | {Prostate cancer, hereditary, 12} | 611868 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | bMERB domain | Calponin homology domain | CH domain superfamily | F-actin Monooxygenase Mical | NT-type C2 domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2B4X7 | InterPro | 1274 | |||||
| UniProtKB:A0A8M2B5E5 | InterPro | 1214 | |||||
| UniProtKB:A0A8M9PLE5 | InterPro | 1014 | |||||
| UniProtKB:X1WCN4 | InterPro | 1183 | |||||
| UniProtKB:A0A8M1QH99 | InterPro | 1273 | |||||
| UniProtKB:A0A8M2B5F3 | InterPro | 1243 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ehbp1-201
(1)
|
Ensembl | 3,270 nt | ||
| mRNA |
ehbp1-203
(1)
|
Ensembl | 5,447 nt | ||
| mRNA |
ehbp1-204
(1)
|
Ensembl | 3,279 nt | ||
| mRNA |
ehbp1-205
(1)
|
Ensembl | 2,103 nt | ||
| mRNA |
ehbp1-206
(1)
|
Ensembl | 3,081 nt | ||
| mRNA |
ehbp1-207
(1)
|
Ensembl | 3,114 nt | ||
| mRNA |
ehbp1-208
(1)
|
Ensembl | 3,216 nt | ||
| mRNA |
ehbp1-209
(1)
|
Ensembl | 1,923 nt | ||
| mRNA |
ehbp1-210
(1)
|
Ensembl | 3,186 nt | ||
| ncRNA |
ehbp1-002
(1)
|
Ensembl | 493 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-63B16 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-50G2 | ZFIN Curated Data | |
| Contained in | BAC | DKEYP-74F1 | ||
| Encodes | EST | fc92e03 |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_005158531 (1) | 5547 nt | ||
| Genomic | GenBank:BX649529 (1) | 216647 nt | ||
| Polypeptide | UniProtKB:A0A8M2B4X7 (1) | 1274 aa |
- Comparative Orthology
- Alliance
- Dragojević, J., Mihaljević, I., Popović, M., Zaja, R., Smital, T. (2018) In vitro characterization of zebrafish (Danio rerio) organic anion transporters Oat2a-e. Toxicology in vitro : an international journal published in association with BIBRA. 46:246-256
- Diotel, N., Viales, R.R., Armant, O., März, M., Ferg, M., Rastegar, S., Strähle, U. (2015) Comprehensive expression map of transcription regulators in the adult zebrafish telencephalon reveals distinct neurogenic niches. The Journal of comparative neurology. 523(8):1202-21
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Irimia, M., Tena, J.J., Alexis, M., Fernandez-Miñan, A., Maeso, I., Bogdanovic, O., de la Calle-Mustienes, E., Roy, S.W., Gómez-Skarmeta, J.L., and Fraser, H.B. (2012) Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints. Genome research. 22(12):2356-2367
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